RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 CNNM2Q9H8M5 875 aa11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 GBA2Q9HCG7 927 aaPredicted RBP11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 SNX14Q9Y5W7 946 aa11.66□□□□□ -0.54
SOX2-OT-249ENST00000628810 CAP2P40123 477 aa11.65□□□□□ -0.54
SOX2-OT-249ENST00000628810 KRT32Q14532 448 aa11.65□□□□□ -0.54
SOX2-OT-249ENST00000628810 CERKLQ49MI3 558 aaPredicted RBP11.65□□□□□ -0.54
SOX2-OT-249ENST00000628810 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.65□□□□□ -0.54
SOX2-OT-249ENST00000628810 ARMC9Q7Z3E5 817 aa11.65□□□□□ -0.54
SOX2-OT-249ENST00000628810 MB21D2Q8IYB1 491 aaPredicted RBP11.65□□□□□ -0.54
SOX2-OT-249ENST00000628810 UPF2Q9HAU5 1272 aaKnown RBP11.65□□□□□ -0.54
SOX2-OT-249ENST00000628810 ANGEL1Q9UNK9 670 aaKnown RBP11.65□□□□□ -0.54
SOX2-OT-249ENST00000628810 IGKV6D-41A0A0C4DH26 115 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 PRDM1O75626 825 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 INPP5BP32019 993 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 NOVP48745 357 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 VGLL4Q14135 290 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 ANKRD13AQ8IZ07 590 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 SCYL3Q8IZE3 742 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 C2orf69Q8N8R5 385 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 ESR2Q92731 530 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 TBC1D32Q96NH3 1257 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 KRT23Q9C075 422 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 ZNF408Q9H9D4 720 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 MKNK2Q9HBH9 465 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 INCENPQ9NQS7 918 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 ZBTB21Q9ULJ3 1066 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 SNCAIPQ9Y6H5 919 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 PHIPQ8WWQ0 1821 aa11.64□□□□□ -0.55
SOX2-OT-249ENST00000628810 WDR19Q8NEZ3 1342 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 ASNSP08243 561 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 AKR1B1P15121 316 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 JAG1P78504 1218 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 TRDNQ13061 729 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 ABCB5Q2M3G0 1257 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 ADCK5Q3MIX3 580 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 TMEM179Q6ZVK1 233 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 MOB2Q70IA6 237 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 RALYLQ86SE5 291 aaKnown RBP11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 ZNF444Q8N0Y2 327 aaPredicted RBP11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 NEDD1Q8NHV4 660 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 NCOA7Q8NI08 942 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 HHIPL1Q96JK4 782 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 MTA3Q9BTC8 594 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 C22orf23Q9BZE7 217 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 TCP11L1Q9NUJ3 509 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
SOX2-OT-249ENST00000628810 TMEM88BA6NKF7 163 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 B4E1Z4 1266 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 KDM4AO75164 1064 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 GDF11O95390 407 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 GH2P01242 217 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 HMGB1P09429 215 aaKnown RBP11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 TSPY3P0CV98 308 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 TSPY8P0CW00 308 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 APLP1P51693 650 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 TFAP4Q01664 338 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 PRKG1Q13976 671 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 NEK1Q96PY6 1258 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 KIF2CQ99661 725 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 CSADQ9Y600 493 aa11.62□□□□□ -0.55
SOX2-OT-249ENST00000628810 THSD7BQ9C0I4 1608 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 TSPY2A6NKD2 308 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 UBE2Q2LH0YL09 131 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 RANBP6O60518 1105 aaKnown RBP11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 PTPRAP18433 802 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 PSMA5P28066 241 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 MCM5P33992 734 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 ANTXR2P58335 489 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 COL9A3Q14050 684 aaPredicted RBP11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 TTLL12Q14166 644 aaPredicted RBP11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 FAM47AQ5JRC9 791 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 RRP12Q5JTH9 1297 aaKnown RBP11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 CYB5R4Q7L1T6 521 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 FBXL16Q8N461 479 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 ZSWIM6Q9HCJ5 1215 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 CABP5Q9NP86 173 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 PICK1Q9NRD5 415 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 IL17RBQ9NRM6 502 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 ZSWIM5Q9P217 1185 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 SYNPO2Q9UMS6 1093 aa11.61□□□□□ -0.55
SOX2-OT-249ENST00000628810 LOC285556D6RIA3 1793 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 USP17L5A8MUK1 530 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 RPS6KB1P23443 525 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 HUNKP57058 714 aa11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 EXOSC10Q01780 885 aaKnown RBP11.6□□□□□ -0.55
SOX2-OT-249ENST00000628810 ICA1Q05084 483 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms