RNA–Protein interactions for RNA: ENST00000628415.2

EPB41L1-218, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 2 BASIC

Gene EPB41L1, Length 3,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-218ENST00000628415 SSBP05455 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 CBX1P83916 185 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 METTL16Q86W50 562 aaKnown RBP12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 PNMA1Q8ND90 353 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 KIF20AO95235 890 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 MMP1P03956 469 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 LETM2Q2VYF4 491 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 TYW1BQ6NUM6 668 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 COA7Q96BR5 231 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 HINFPQ9BQA5 517 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 RNF41Q9H4P4 317 aaPredicted RBP12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 CNNM2Q9H8M5 875 aa12.59□□□□□ -0.39
EPB41L1-218ENST00000628415 DDR1Q08345 913 aa12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 KARSQ15046 597 aaKnown RBP12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 SYMPKQ92797 1274 aaKnown RBP12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 BIN2Q9UBW5 565 aaPredicted RBP12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 DISP2A7MBM2 1401 aa12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 FMR1Q06787 632 aaKnown RBP eCLIP12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
EPB41L1-218ENST00000628415 FMNL1O95466 1100 aaPredicted RBP12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 MMP10P09238 476 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 GLI3P10071 1580 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 GYS1P13807 737 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 TM4SF1P30408 202 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 UBASH3AP57075 661 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 VPS72Q15906 364 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 BMP6P22004 513 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 STAG1Q8WVM7 1258 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 EPC1Q9H2F5 836 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 TMEM260Q9NX78 707 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 GGA1Q9UJY5 639 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 TRIM75PA6NK02 468 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 ZFPM1Q8IX07 1006 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 IL17RBQ9NRM6 502 aa12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 THRAP3Q9Y2W1 955 aaKnown RBP12.57□□□□□ -0.4
EPB41L1-218ENST00000628415 DEXIO95424 95 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 IFNAR1P17181 557 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 SF3B3Q15393 1217 aaKnown RBP12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 ZHX3Q9H4I2 956 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 NFE2L3Q9Y4A8 694 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 FAM205AQ6ZU69 1335 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 NFIAQ12857 509 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 PTPAQ15257 358 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 ENOX2Q16206 610 aaKnown RBP12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 CCDC96Q2M329 555 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 FBXO33Q7Z6M2 555 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 KIAA1524Q8TCG1 905 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 NUP88Q99567 741 aaPredicted RBP12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 A0A0U1RQJ8 604 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 FANCCQ00597 558 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 TROAPQ12815 778 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 PKN1Q16512 942 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 UVSSAQ2YD98 709 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 TTBK2Q6IQ55 1244 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 ATRIPQ8WXE1 791 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 ZC3H12CQ9C0D7 883 aaKnown RBP12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 BRCA2P51587 3418 aa12.56□□□□□ -0.4
EPB41L1-218ENST00000628415 MARCH6O60337 910 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 GDF11O95390 407 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 KRT2P35908 639 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 TXNRD1Q16881 649 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 DPP8Q6V1X1 898 aaPredicted RBP12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 NAT10Q9H0A0 1025 aaKnown RBP12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 VPS16Q9H269 839 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 CLRN2A0PK11 232 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 TFRCP02786 760 aaKnown RBP12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 ST5P78524 1137 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 BARGINQ6ZT62 677 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 EYA3Q99504 573 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 IRX2Q9BZI1 471 aaPredicted RBP12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 TMEM51Q9NW97 253 aa12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
EPB41L1-218ENST00000628415 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 USP17L5A8MUK1 530 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 GNAT2P19087 354 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 CMA1P23946 247 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 GTF2F1P35269 517 aaKnown RBP eCLIP12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 SEC23AQ15436 765 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 UBE2SQ16763 222 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 PROM2Q8N271 834 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 MAP3K14Q99558 947 aa12.54□□□□□ -0.4
EPB41L1-218ENST00000628415 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms