RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 ORC3Q9UBD5 711 aaPredicted RBP15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 ZSCAN22P10073 491 aaPredicted RBP15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 MIGA2Q7L4E1 593 aa15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 PNMA1Q8ND90 353 aa15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 TRPM4Q8TD43 1214 aa15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 TMEM47Q9BQJ4 181 aa15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 KAT14Q9H8E8 782 aa15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 WDR33Q9C0J8 1336 aaKnown RBP15.75■□□□□ 0.11
PDXDC1-218ENST00000627450 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 GDF11O95390 407 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 PLEKHA8P1O95397 391 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 RRP1BQ14684 758 aaKnown RBP15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 EHD4Q9H223 541 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 SWAP70Q9UH65 585 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 ATRNL1Q5VV63 1379 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 BAG4O95429 457 aaKnown RBP15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 JAG1P78504 1218 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 KIF4BQ2VIQ3 1234 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 FAM173BQ6P4H8 233 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 DGKHQ86XP1 1220 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 GPC2Q8N158 579 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 FAM151AQ8WW52 585 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 TCHHQ07283 1943 aa15.74■□□□□ 0.11
PDXDC1-218ENST00000627450 GUCY1A2P33402 732 aa15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 HMGN5P82970 282 aaKnown RBP15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 TCP11L1Q9NUJ3 509 aa15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 GPRC5DQ9NZD1 345 aa15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 MCM4P33991 863 aa15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 ATP2B2Q01814 1243 aa15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 RASA3Q14644 834 aa15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 CERKLQ49MI3 558 aaPredicted RBP15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 HACL1Q9UJ83 578 aa15.73■□□□□ 0.11
PDXDC1-218ENST00000627450 H7C1D1 291 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 PRAMEF18Q5VWM3 479 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 LRRC47Q8N1G4 583 aaKnown RBP15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 STAG2Q8N3U4 1231 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 PIBF1Q8WXW3 757 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 MTMR4Q9NYA4 1195 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 H3BQV1 296 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 F13A1P00488 732 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 GOLGA8HP0CJ92 632 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 PDCP20941 246 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 IFFO2Q5TF58 517 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 MCTP1Q6DN14 999 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 NBPF11Q86T75 865 aa15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 FOXP4Q8IVH2 680 aaPredicted RBP15.72■□□□□ 0.11
PDXDC1-218ENST00000627450 HIRAP54198 1017 aaPredicted RBP15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 CPVLQ9H3G5 476 aa15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 GDPD2Q9HCC8 539 aa15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 CLIP2Q9UDT6 1046 aa15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 IFNAR1P17181 557 aa15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 TATDN1Q6P1N9 297 aa15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 CPLX2Q6PUV4 134 aaKnown RBP15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 ANKS1AQ92625 1134 aa15.71■□□□□ 0.11
PDXDC1-218ENST00000627450 DDAH1O94760 285 aa15.71■□□□□ 0.1
PDXDC1-218ENST00000627450 SEPT2Q15019 361 aa15.71■□□□□ 0.1
PDXDC1-218ENST00000627450 ANGEL2Q5VTE6 544 aaKnown RBP15.71■□□□□ 0.1
PDXDC1-218ENST00000627450 SRBD1Q8N5C6 995 aaKnown RBP15.71■□□□□ 0.1
PDXDC1-218ENST00000627450 CTCFLQ8NI51 663 aaPredicted RBP15.71■□□□□ 0.1
PDXDC1-218ENST00000627450 PGAP2Q9UHJ9 254 aa15.71■□□□□ 0.1
PDXDC1-218ENST00000627450 NID2Q14112 1375 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 IGKV6D-41A0A0C4DH26 115 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 FKBP1CQ5VVH2 108 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 FAM83AQ86UY5 434 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 METTL16Q86W50 562 aaKnown RBP15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 GBP4Q96PP9 640 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 POLR2AP24928 1970 aaKnown RBP15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 CCDC196A0A1B0GTZ2 297 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 CDKL5O76039 1030 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 SSRP1Q08945 709 aaKnown RBP15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 FUT2Q10981 343 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 USP17L2Q6R6M4 530 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 DLK2Q6UY11 383 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 ALG1Q9BT22 464 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 FZD1Q9UP38 647 aa15.7■□□□□ 0.1
PDXDC1-218ENST00000627450 FMNL1O95466 1100 aaPredicted RBP15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 GH2P01242 217 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 VEGFAP15692 232 aaPredicted RBP15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 RCAN1P53805 252 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 C8orf76Q96K31 380 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 DEFB129Q9H1M3 183 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 MAD2L2Q9UI95 211 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 V9GY48 417 aaPredicted RBP15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 PLIN4Q96Q06 1357 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 RAD21O60216 631 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 CALM1P0DP23 149 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 CALM2P0DP24 149 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 CALM3P0DP25 149 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 TMTC3Q6ZXV5 915 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 TEPSINQ96N21 525 aa15.69■□□□□ 0.1
PDXDC1-218ENST00000627450 USP17L5A8MUK1 530 aa15.68■□□□□ 0.1
PDXDC1-218ENST00000627450 TTLL1O95922 423 aa15.68■□□□□ 0.1
PDXDC1-218ENST00000627450 TOP1P11387 765 aaKnown RBP15.68■□□□□ 0.1
PDXDC1-218ENST00000627450 DNM1Q05193 864 aaKnown RBP15.68■□□□□ 0.1
PDXDC1-218ENST00000627450 ABCB5Q2M3G0 1257 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms