RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 HHIPL1Q96JK4 782 aa8.69□□□□□ -1.02
NPLOC4-221ENST00000625705 IDI2Q9BXS1 227 aa8.69□□□□□ -1.02
NPLOC4-221ENST00000625705 ZNF341Q9BYN7 854 aa8.69□□□□□ -1.02
NPLOC4-221ENST00000625705 OSBPL5Q9H0X9 879 aaPredicted RBP8.69□□□□□ -1.02
NPLOC4-221ENST00000625705 ACTN4O43707 911 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 GFRA3O60609 400 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 POLR3DP05423 398 aaPredicted RBP8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 GGCXP38435 758 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 UBE3CQ15386 1083 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 CENPQQ7L2Z9 268 aaPredicted RBP8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 APPBP2Q92624 585 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 EVI5LQ96CN4 794 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 TEPSINQ96N21 525 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 ARMT1Q9H993 441 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 ELP3Q9H9T3 547 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 DDX4Q9NQI0 724 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 PICK1Q9NRD5 415 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 FLT1P17948 1338 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 FOCADQ5VW36 1801 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 OTOFQ9HC10 1997 aa8.68□□□□□ -1.02
NPLOC4-221ENST00000625705 RNF113AO15541 343 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 AOC2O75106 756 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 USP2O75604 605 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 APPP05067 770 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 MAP2K1Q02750 393 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 RFX7Q2KHR2 1363 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 METTL3Q86U44 580 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 RASAL3Q86YV0 1011 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 ZFPM1Q8IX07 1006 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 LCORLQ8N3X6 602 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 DNAJC5GQ8N7S2 189 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 CLMNQ96JQ2 1002 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 CDK5RAP2Q96SN8 1893 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 DHX36Q9H2U1 1008 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 DIAPH3Q9NSV4 1193 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 STAP2Q9UGK3 403 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 PALD1Q9ULE6 856 aa8.67□□□□□ -1.02
NPLOC4-221ENST00000625705 MYH1P12882 1939 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 COL2A1P02458 1487 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 ATRNL1Q5VV63 1379 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 SALL3Q9BXA9 1300 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 TCRBV5S4A2TA0A5A2 114 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 DDTLA6NHG4 134 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 FAM196BA6NMK8 535 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 GPR37O15354 613 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 TLL1O43897 1013 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 MAP2K2P36507 400 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 SREBF2Q12772 1141 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 VGLL4Q14135 290 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 TTC6Q86TZ1 520 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 PLEKHM2Q8IWE5 1019 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 SDR42E1Q8WUS8 393 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 OPTNQ96CV9 577 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 MCM9Q9NXL9 1143 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 PI4KBQ9UBF8 816 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 HERC5Q9UII4 1024 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 SLC4A4Q9Y6R1 1079 aa8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 V9GY48 417 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-221ENST00000625705 UNCXA6NJT0 531 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 GPAA1O43292 621 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 HSPA1AP0DMV8 641 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 HSPA1BP0DMV9 641 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 GNAT2P19087 354 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 INPP5BP32019 993 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 TDO2P48775 406 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 KIF23Q02241 960 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 LAPTM4AQ15012 233 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 MAP3K11Q16584 847 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 LDLRAD1Q5T700 205 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 ZKSCAN4Q969J2 545 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 WNK4Q96J92 1243 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 RIOK1Q9BRS2 568 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 NACAP1Q9BZK3 213 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 DOCK1Q14185 1865 aa8.65□□□□□ -1.02
NPLOC4-221ENST00000625705 THSD7BQ9C0I4 1608 aa8.65□□□□□ -1.03
NPLOC4-221ENST00000625705 MANSC4A6NHS7 340 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 FAM155AB1AL88 458 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 M0R2C6 588 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 HIP1O00291 1037 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 PRKAB2O43741 272 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 CHGBP05060 677 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 ZBTB48P10074 688 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 SPRYD7Q5W111 196 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 SH3BP5LQ7L8J4 393 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 ERO1BQ86YB8 467 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 FOXP4Q8IVH2 680 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 SCYL3Q8IZE3 742 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 JMYQ8N9B5 988 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 PUS7LQ9H0K6 701 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 ATP8A2Q9NTI2 1148 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 SERPINB13Q9UIV8 391 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 ATAD5Q96QE3 1844 aa8.64□□□□□ -1.03
NPLOC4-221ENST00000625705 LAMB1P07942 1786 aa8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 BAZ2AQ9UIF9 1905 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-221ENST00000625705 SPDYE5A6NIY4 337 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms