RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 PANK1Q8TE04 598 aa23.07■■□□□ 1.28
SMN1-211ENST00000625245 C11orf49Q9H6J7 331 aa23.07■■□□□ 1.28
SMN1-211ENST00000625245 OGDHLQ9ULD0 1010 aa23.07■■□□□ 1.28
SMN1-211ENST00000625245 A0A1W2PPC1 479 aa23.06■■□□□ 1.28
SMN1-211ENST00000625245 MNX1P50219 401 aaPredicted RBP23.06■■□□□ 1.28
SMN1-211ENST00000625245 CACNB2Q08289 660 aaPredicted RBP23.06■■□□□ 1.28
SMN1-211ENST00000625245 CCL14Q16627 93 aa23.06■■□□□ 1.28
SMN1-211ENST00000625245 WDR78Q5VTH9 848 aa23.06■■□□□ 1.28
SMN1-211ENST00000625245 POTEEQ6S8J3 1075 aa23.06■■□□□ 1.28
SMN1-211ENST00000625245 BCL11AQ9H165 835 aa23.06■■□□□ 1.28
SMN1-211ENST00000625245 EHD4Q9H223 541 aa23.06■■□□□ 1.28
SMN1-211ENST00000625245 IL1RAPL2Q9NP60 686 aa23.06■■□□□ 1.28
SMN1-211ENST00000625245 CABP5Q9NP86 173 aa23.06■■□□□ 1.28
SMN1-211ENST00000625245 POLR3DP05423 398 aaPredicted RBP23.05■■□□□ 1.28
SMN1-211ENST00000625245 USP14P54578 494 aa23.05■■□□□ 1.28
SMN1-211ENST00000625245 MORN1Q5T089 497 aa23.05■■□□□ 1.28
SMN1-211ENST00000625245 ACER1Q8TDN7 264 aa23.05■■□□□ 1.28
SMN1-211ENST00000625245 USP6NLQ92738 828 aa23.05■■□□□ 1.28
SMN1-211ENST00000625245 C12orf42Q96LP6 360 aa23.05■■□□□ 1.28
SMN1-211ENST00000625245 RABGAP1Q9Y3P9 1069 aa23.05■■□□□ 1.28
SMN1-211ENST00000625245 MAGEB6P1A0A0J9YX57 407 aa23.04■■□□□ 1.28
SMN1-211ENST00000625245 SYN1P17600 705 aa23.04■■□□□ 1.28
SMN1-211ENST00000625245 PLCD1P51178 756 aa23.04■■□□□ 1.28
SMN1-211ENST00000625245 CCNA1P78396 465 aa23.04■■□□□ 1.28
SMN1-211ENST00000625245 APBB1O00213 710 aa23.03■■□□□ 1.28
SMN1-211ENST00000625245 SOX1O00570 391 aaPredicted RBP23.03■■□□□ 1.28
SMN1-211ENST00000625245 CCND3P30281 292 aaPredicted RBP23.03■■□□□ 1.28
SMN1-211ENST00000625245 HSP90AB4PQ58FF6 505 aa23.03■■□□□ 1.28
SMN1-211ENST00000625245 TMED8Q6PL24 325 aaPredicted RBP23.03■■□□□ 1.28
SMN1-211ENST00000625245 CATSPERGQ6ZRH7 1159 aa23.03■■□□□ 1.28
SMN1-211ENST00000625245 MIER1Q8N108 512 aa23.03■■□□□ 1.28
SMN1-211ENST00000625245 APBA2Q99767 749 aa23.03■■□□□ 1.28
SMN1-211ENST00000625245 RIOK1Q9BRS2 568 aaKnown RBP23.03■■□□□ 1.28
SMN1-211ENST00000625245 KIAA1683Q9H0B3 1180 aa23.03■■□□□ 1.28
SMN1-211ENST00000625245 CNMDO75829 334 aa23.02■■□□□ 1.28
SMN1-211ENST00000625245 GLRX3O76003 335 aaKnown RBP23.02■■□□□ 1.28
SMN1-211ENST00000625245 VCAM1P19320 739 aa23.02■■□□□ 1.28
SMN1-211ENST00000625245 SHMT1P34896 483 aa23.02■■□□□ 1.28
SMN1-211ENST00000625245 TTF1Q15361 905 aaPredicted RBP23.02■■□□□ 1.28
SMN1-211ENST00000625245 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
SMN1-211ENST00000625245 RHPN1Q8TCX5 695 aa23.02■■□□□ 1.28
SMN1-211ENST00000625245 LRCH3Q96II8 777 aa23.02■■□□□ 1.28
SMN1-211ENST00000625245 NAV1Q8NEY1 1877 aa23.01■■□□□ 1.27
SMN1-211ENST00000625245 MAP2K5Q13163 448 aa23.01■■□□□ 1.27
SMN1-211ENST00000625245 EDC3Q96F86 508 aaKnown RBP23.01■■□□□ 1.27
SMN1-211ENST00000625245 DNAJC2Q99543 621 aaKnown RBP23.01■■□□□ 1.27
SMN1-211ENST00000625245 GDF15Q99988 308 aa23.01■■□□□ 1.27
SMN1-211ENST00000625245 CRNKL1Q9BZJ0 848 aaKnown RBP23.01■■□□□ 1.27
SMN1-211ENST00000625245 RPAP3Q9H6T3 665 aaPredicted RBP23.01■■□□□ 1.27
SMN1-211ENST00000625245 MPHOSPH10O00566 681 aaKnown RBP23■■□□□ 1.27
SMN1-211ENST00000625245 PDE6AP16499 860 aa23■■□□□ 1.27
SMN1-211ENST00000625245 SEPT2Q15019 361 aa23■■□□□ 1.27
SMN1-211ENST00000625245 MCM9Q9NXL9 1143 aa23■■□□□ 1.27
SMN1-211ENST00000625245 GOLIM4O00461 696 aa22.99■■□□□ 1.27
SMN1-211ENST00000625245 BMP8BP34820 402 aa22.99■■□□□ 1.27
SMN1-211ENST00000625245 MFSD14CQ5VZR4 134 aa22.99■■□□□ 1.27
SMN1-211ENST00000625245 LHX8Q68G74 356 aa22.99■■□□□ 1.27
SMN1-211ENST00000625245 CLASRPQ8N2M8 674 aaKnown RBP22.99■■□□□ 1.27
SMN1-211ENST00000625245 BTBD7Q9P203 1132 aa22.99■■□□□ 1.27
SMN1-211ENST00000625245 IVNS1ABPQ9Y6Y0 642 aa22.99■■□□□ 1.27
SMN1-211ENST00000625245 PFASO15067 1338 aa22.99■■□□□ 1.27
SMN1-211ENST00000625245 ZNF532Q9HCE3 1301 aa22.99■■□□□ 1.27
SMN1-211ENST00000625245 SLC15A5A6NIM6 579 aa22.98■■□□□ 1.27
SMN1-211ENST00000625245 IFIT2P09913 472 aaKnown RBP22.98■■□□□ 1.27
SMN1-211ENST00000625245 PTPREP23469 700 aa22.98■■□□□ 1.27
SMN1-211ENST00000625245 GUCY1A2P33402 732 aa22.98■■□□□ 1.27
SMN1-211ENST00000625245 SPDYE16A6NNV3 312 aaPredicted RBP22.97■■□□□ 1.27
SMN1-211ENST00000625245 MAGEA10P43363 369 aaPredicted RBP22.97■■□□□ 1.27
SMN1-211ENST00000625245 ATP2B2Q01814 1243 aa22.97■■□□□ 1.27
SMN1-211ENST00000625245 EVX2Q03828 476 aa22.97■■□□□ 1.27
SMN1-211ENST00000625245 SDR42E1Q8WUS8 393 aa22.97■■□□□ 1.27
SMN1-211ENST00000625245 KIF1BPQ96EK5 621 aa22.97■■□□□ 1.27
SMN1-211ENST00000625245 FLRT1Q9NZU1 646 aa22.97■■□□□ 1.27
SMN1-211ENST00000625245 CNGA1P29973 690 aa22.96■■□□□ 1.27
SMN1-211ENST00000625245 GABPAQ06546 454 aa22.96■■□□□ 1.27
SMN1-211ENST00000625245 LBX2Q6XYB7 198 aa22.96■■□□□ 1.27
SMN1-211ENST00000625245 CYP2D6P10635 497 aa22.95■■□□□ 1.26
SMN1-211ENST00000625245 MS4A1P11836 297 aa22.95■■□□□ 1.26
SMN1-211ENST00000625245 COL6A1P12109 1028 aa22.95■■□□□ 1.26
SMN1-211ENST00000625245 MYH8P13535 1937 aa22.95■■□□□ 1.26
SMN1-211ENST00000625245 LCORLQ8N3X6 602 aa22.95■■□□□ 1.26
SMN1-211ENST00000625245 TANGO6Q9C0B7 1094 aa22.95■■□□□ 1.26
SMN1-211ENST00000625245 FRMPD3Q5JV73 1810 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 A0A1W2PRG0 241 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 HMMRO75330 724 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 COG2Q14746 738 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 LRRC26Q2I0M4 334 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 RPAP2Q8IXW5 612 aaPredicted RBP22.94■■□□□ 1.26
SMN1-211ENST00000625245 SLC44A5Q8NCS7 719 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 NPLOC4Q8TAT6 608 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.94■■□□□ 1.26
SMN1-211ENST00000625245 UBE2OQ9C0C9 1292 aaKnown RBP22.94■■□□□ 1.26
SMN1-211ENST00000625245 ARMT1Q9H993 441 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 DCP1AQ9NPI6 582 aaPredicted RBP22.94■■□□□ 1.26
SMN1-211ENST00000625245 HOXC10Q9NYD6 342 aa22.94■■□□□ 1.26
SMN1-211ENST00000625245 ZBED9Q6R2W3 1325 aa22.93■■□□□ 1.26
SMN1-211ENST00000625245 TCRBV5S4A2TA0A5A2 114 aa22.93■■□□□ 1.26
SMN1-211ENST00000625245 GRB14Q14449 540 aa22.93■■□□□ 1.26
SMN1-211ENST00000625245 DPP9Q86TI2 863 aa22.93■■□□□ 1.26
SMN1-211ENST00000625245 DYNLL2Q96FJ2 89 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms