RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 ZNF507Q8TCN5 953 aa5.93□□□□□ -1.46
ATRX-209ENST00000623242 TMEM40Q8WWA1 233 aa5.93□□□□□ -1.46
ATRX-209ENST00000623242 EZH1Q92800 747 aaPredicted RBP5.93□□□□□ -1.46
ATRX-209ENST00000623242 ATG4CQ96DT6 458 aa5.93□□□□□ -1.46
ATRX-209ENST00000623242 DPH2Q9BQC3 489 aaPredicted RBP5.93□□□□□ -1.46
ATRX-209ENST00000623242 SEMA6CQ9H3T2 930 aa5.93□□□□□ -1.46
ATRX-209ENST00000623242 PIDD1Q9HB75 910 aa5.93□□□□□ -1.46
ATRX-209ENST00000623242 GMIPQ9P107 970 aa5.93□□□□□ -1.46
ATRX-209ENST00000623242 KLHL3Q9UH77 587 aa5.93□□□□□ -1.46
ATRX-209ENST00000623242 SMAD7O15105 426 aaKnown RBP5.92□□□□□ -1.46
ATRX-209ENST00000623242 KLF4O43474 513 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 GAS2O43903 313 aaKnown RBP5.92□□□□□ -1.46
ATRX-209ENST00000623242 STK10O94804 968 aaKnown RBP5.92□□□□□ -1.46
ATRX-209ENST00000623242 ACRP10323 421 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 IMPDH2P12268 514 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 CAP2P40123 477 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 USP11P51784 963 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 UVSSAQ2YD98 709 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 ARSHQ5FYA8 562 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 CDCP2Q5VXM1 449 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 FAM20CQ8IXL6 584 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 UTP4Q969X6 686 aaKnown RBP5.92□□□□□ -1.46
ATRX-209ENST00000623242 TNKS2Q9H2K2 1166 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 CNNM2Q9H8M5 875 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 LGR6Q9HBX8 967 aa5.92□□□□□ -1.46
ATRX-209ENST00000623242 CTTNBP2Q8WZ74 1663 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 CST3P01034 146 aaPredicted RBP5.91□□□□□ -1.46
ATRX-209ENST00000623242 NME1P15531 152 aaKnown RBP5.91□□□□□ -1.46
ATRX-209ENST00000623242 MAP4P27816 1152 aaKnown RBP5.91□□□□□ -1.46
ATRX-209ENST00000623242 ZYXQ15942 572 aaKnown RBP5.91□□□□□ -1.46
ATRX-209ENST00000623242 PRAMEF13Q5VWM6 474 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 SLC6A19Q695T7 634 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 ANKS3Q6ZW76 656 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.91□□□□□ -1.46
ATRX-209ENST00000623242 FAM13CQ8NE31 585 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 HNRNPLLQ8WVV9 542 aaKnown RBP5.91□□□□□ -1.46
ATRX-209ENST00000623242 PSMG3-AS1Q96PY0 264 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 CRBNQ96SW2 442 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 SEMA6BQ9H3T3 888 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 PRKAG3Q9UGI9 489 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 PCOLCE2Q9UKZ9 415 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 DAGLAQ9Y4D2 1042 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 FHOD3Q2V2M9 1422 aa5.91□□□□□ -1.46
ATRX-209ENST00000623242 TNFRSF10CO14798 259 aa5.9□□□□□ -1.46
ATRX-209ENST00000623242 POLR2BP30876 1174 aaKnown RBP5.9□□□□□ -1.46
ATRX-209ENST00000623242 LRRFIP1Q32MZ4 808 aaKnown RBP5.9□□□□□ -1.46
ATRX-209ENST00000623242 CDC37L1Q7L3B6 337 aa5.9□□□□□ -1.46
ATRX-209ENST00000623242 ARMCX6Q7L4S7 300 aa5.9□□□□□ -1.46
ATRX-209ENST00000623242 NLRC3Q7RTR2 1065 aa5.9□□□□□ -1.46
ATRX-209ENST00000623242 SLFN12Q8IYM2 578 aa5.9□□□□□ -1.46
ATRX-209ENST00000623242 TAB3Q8N5C8 712 aaPredicted RBP5.9□□□□□ -1.46
ATRX-209ENST00000623242 OR6P1Q8NGX9 317 aa5.9□□□□□ -1.46
ATRX-209ENST00000623242 SLC9A7Q96T83 725 aa5.9□□□□□ -1.46
ATRX-209ENST00000623242 SSU72Q9NP77 194 aaKnown RBP5.9□□□□□ -1.46
ATRX-209ENST00000623242 C1GALT1Q9NS00 363 aa5.9□□□□□ -1.46
ATRX-209ENST00000623242 PTPRGP23470 1445 aa5.9□□□□□ -1.47
ATRX-209ENST00000623242 CLASP1Q7Z460 1538 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 A0A1W2PQH9 124 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 GUCY2CP25092 1073 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 CASP7P55210 303 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 CYB5RLQ6IPT4 315 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 TTC6Q86TZ1 520 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 SHISA5Q8N114 240 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 KCT2Q8NC54 265 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 PMFBP1Q8TBY8 1022 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 XAGE3Q8WTP9 111 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 PPP1R13LQ8WUF5 828 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 KIF2CQ99661 725 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 TM9SF2Q99805 663 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 HIRIP3Q9BW71 556 aaPredicted RBP5.89□□□□□ -1.47
ATRX-209ENST00000623242 FOXQ1Q9C009 403 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 LNPKQ9C0E8 428 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 LTBP3Q9NS15 1303 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 EFCAB5A4FU69 1503 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 UGGT2Q9NYU1 1516 aa5.89□□□□□ -1.47
ATRX-209ENST00000623242 FAM95CA0A1B0GW59 222 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 FAM86C2PA6NEL3 165 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 UBOX5O94941 541 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 SLITRK5O94991 958 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 RXRBP28702 533 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 YARSP54577 528 aaKnown RBP5.88□□□□□ -1.47
ATRX-209ENST00000623242 CDK5R2Q13319 367 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 SERINC3Q13530 473 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 MLECQ14165 292 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 UNC5AQ6ZN44 842 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 BEND4Q6ZU67 534 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 DPH6Q7L8W6 267 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 CELF2-AS1Q8N7Q2 184 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 C19orf47Q8N9M1 422 aaKnown RBP5.88□□□□□ -1.47
ATRX-209ENST00000623242 RIN3Q8TB24 985 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 BAHD1Q8TBE0 780 aaPredicted RBP5.88□□□□□ -1.47
ATRX-209ENST00000623242 MICAL1Q8TDZ2 1067 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 GATA6Q92908 595 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 TP53INP1Q96A56 240 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 KCNF1Q9H3M0 494 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 TPSG1Q9NRR2 321 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 FMN1Q68DA7 1419 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 ARHGAP35Q9NRY4 1499 aa5.88□□□□□ -1.47
ATRX-209ENST00000623242 COL17A1Q9UMD9 1497 aaPredicted RBP5.88□□□□□ -1.47
ATRX-209ENST00000623242 HMX2A2RU54 273 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms