RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 ZFYP08048 801 aaPredicted RBP25.35■■□□□ 1.65
PMPCA-212ENST00000622209 HERVK_113P62684 666 aa25.35■■□□□ 1.65
PMPCA-212ENST00000622209 TATDN1Q6P1N9 297 aa25.35■■□□□ 1.65
PMPCA-212ENST00000622209 TTC6Q86TZ1 520 aa25.35■■□□□ 1.65
PMPCA-212ENST00000622209 PLEKHM2Q8IWE5 1019 aa25.35■■□□□ 1.65
PMPCA-212ENST00000622209 HTATIP2Q9BUP3 242 aa25.35■■□□□ 1.65
PMPCA-212ENST00000622209 TXNRD2Q9NNW7 524 aa25.35■■□□□ 1.65
PMPCA-212ENST00000622209 SERPINB13Q9UIV8 391 aa25.35■■□□□ 1.65
PMPCA-212ENST00000622209 ZYXQ15942 572 aaKnown RBP25.34■■□□□ 1.65
PMPCA-212ENST00000622209 USP17L2Q6R6M4 530 aa25.34■■□□□ 1.65
PMPCA-212ENST00000622209 GPRC5AQ8NFJ5 357 aa25.34■■□□□ 1.65
PMPCA-212ENST00000622209 CRNKL1Q9BZJ0 848 aaKnown RBP25.34■■□□□ 1.65
PMPCA-212ENST00000622209 RBPJLQ9UBG7 517 aa25.34■■□□□ 1.65
PMPCA-212ENST00000622209 SIPA1L1O43166 1804 aa25.34■■□□□ 1.65
PMPCA-212ENST00000622209 RNF113AO15541 343 aaKnown RBP25.33■■□□□ 1.65
PMPCA-212ENST00000622209 PLCD1P51178 756 aa25.33■■□□□ 1.65
PMPCA-212ENST00000622209 RAB3GAP1Q15042 981 aa25.33■■□□□ 1.65
PMPCA-212ENST00000622209 CERKLQ49MI3 558 aaPredicted RBP25.33■■□□□ 1.65
PMPCA-212ENST00000622209 EVI5LQ96CN4 794 aa25.33■■□□□ 1.65
PMPCA-212ENST00000622209 EHD4Q9H223 541 aa25.33■■□□□ 1.65
PMPCA-212ENST00000622209 PAK6Q9NQU5 681 aaPredicted RBP25.33■■□□□ 1.65
PMPCA-212ENST00000622209 MGAMO43451 1857 aa25.32■■□□□ 1.64
PMPCA-212ENST00000622209 POLR3DP05423 398 aaPredicted RBP25.32■■□□□ 1.64
PMPCA-212ENST00000622209 CYP2B6P20813 491 aa25.32■■□□□ 1.64
PMPCA-212ENST00000622209 TRIM32Q13049 653 aa25.32■■□□□ 1.64
PMPCA-212ENST00000622209 SLFNL1Q499Z3 407 aa25.32■■□□□ 1.64
PMPCA-212ENST00000622209 FEZ1Q99689 392 aa25.32■■□□□ 1.64
PMPCA-212ENST00000622209 PAGR1Q9BTK6 254 aa25.32■■□□□ 1.64
PMPCA-212ENST00000622209 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.32■■□□□ 1.64
PMPCA-212ENST00000622209 CEP290O15078 2479 aa25.32■■□□□ 1.64
PMPCA-212ENST00000622209 LOC285556D6RIA3 1793 aa25.31■■□□□ 1.64
PMPCA-212ENST00000622209 HMGCRP04035 888 aa25.31■■□□□ 1.64
PMPCA-212ENST00000622209 ABCB5Q2M3G0 1257 aa25.31■■□□□ 1.64
PMPCA-212ENST00000622209 Q3C1V9 767 aa25.31■■□□□ 1.64
PMPCA-212ENST00000622209 CHRDL2Q6WN34 429 aa25.31■■□□□ 1.64
PMPCA-212ENST00000622209 TICAM2Q86XR7 235 aa25.31■■□□□ 1.64
PMPCA-212ENST00000622209 FSD1Q9BTV5 496 aa25.31■■□□□ 1.64
PMPCA-212ENST00000622209 MYH7P12883 1935 aa25.31■■□□□ 1.64
PMPCA-212ENST00000622209 MBD4O95243 580 aa25.3■■□□□ 1.64
PMPCA-212ENST00000622209 CHGBP05060 677 aa25.3■■□□□ 1.64
PMPCA-212ENST00000622209 FXR1P51114 621 aaKnown RBP eCLIP25.3■■□□□ 1.64
PMPCA-212ENST00000622209 CCAR1Q8IX12 1150 aaKnown RBP25.3■■□□□ 1.64
PMPCA-212ENST00000622209 LCORLQ8N3X6 602 aa25.3■■□□□ 1.64
PMPCA-212ENST00000622209 ACER1Q8TDN7 264 aa25.3■■□□□ 1.64
PMPCA-212ENST00000622209 APPBP2Q92624 585 aa25.3■■□□□ 1.64
PMPCA-212ENST00000622209 ARMT1Q9H993 441 aa25.3■■□□□ 1.64
PMPCA-212ENST00000622209 FOCADQ5VW36 1801 aa25.3■■□□□ 1.64
PMPCA-212ENST00000622209 ATAD5Q96QE3 1844 aa25.3■■□□□ 1.64
PMPCA-212ENST00000622209 SHMT1P34896 483 aa25.29■■□□□ 1.64
PMPCA-212ENST00000622209 EVX2Q03828 476 aa25.29■■□□□ 1.64
PMPCA-212ENST00000622209 POTEEQ6S8J3 1075 aa25.29■■□□□ 1.64
PMPCA-212ENST00000622209 CRISPLD2Q9H0B8 497 aa25.29■■□□□ 1.64
PMPCA-212ENST00000622209 PUS7LQ9H0K6 701 aaKnown RBP25.29■■□□□ 1.64
PMPCA-212ENST00000622209 CABP5Q9NP86 173 aa25.29■■□□□ 1.64
PMPCA-212ENST00000622209 MCM9Q9NXL9 1143 aa25.29■■□□□ 1.64
PMPCA-212ENST00000622209 CDK5RAP2Q96SN8 1893 aa25.29■■□□□ 1.64
PMPCA-212ENST00000622209 ERVK-9P63128 1117 aa25.28■■□□□ 1.64
PMPCA-212ENST00000622209 ERVK-24P63145 666 aa25.28■■□□□ 1.64
PMPCA-212ENST00000622209 TRIB2Q92519 343 aa25.28■■□□□ 1.64
PMPCA-212ENST00000622209 NUDT12Q9BQG2 462 aa25.28■■□□□ 1.64
PMPCA-212ENST00000622209 PORCNQ9H237 461 aa25.28■■□□□ 1.64
PMPCA-212ENST00000622209 HMX1Q9NP08 348 aaPredicted RBP25.28■■□□□ 1.64
PMPCA-212ENST00000622209 NR2E3Q9Y5X4 410 aa25.28■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L15C9J2P7 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L13C9JLJ4 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L11C9JVI0 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L18D6R9N7 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L22D6RA61 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L17D6RBQ6 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L19D6RCP7 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L20D6RJB6 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 PDE4AP27815 886 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 MAPK4P31152 587 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP17L24Q0WX57 530 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 CENPQQ7L2Z9 268 aaPredicted RBP25.27■■□□□ 1.64
PMPCA-212ENST00000622209 OSBP2Q969R2 916 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 PAWRQ96IZ0 340 aaKnown RBP25.27■■□□□ 1.64
PMPCA-212ENST00000622209 ATP8A2Q9NTI2 1148 aa25.27■■□□□ 1.64
PMPCA-212ENST00000622209 USP14P54578 494 aa25.26■■□□□ 1.63
PMPCA-212ENST00000622209 DIS3LQ8TF46 1054 aaKnown RBP25.26■■□□□ 1.63
PMPCA-212ENST00000622209 GTF3C2Q8WUA4 911 aaPredicted RBP25.26■■□□□ 1.63
PMPCA-212ENST00000622209 SDR42E1Q8WUS8 393 aa25.26■■□□□ 1.63
PMPCA-212ENST00000622209 C12orf42Q96LP6 360 aa25.26■■□□□ 1.63
PMPCA-212ENST00000622209 KIAA1683Q9H0B3 1180 aa25.26■■□□□ 1.63
PMPCA-212ENST00000622209 RPTORQ8N122 1335 aa25.26■■□□□ 1.63
PMPCA-212ENST00000622209 TRIM6-TRIM34B2RNG4 842 aa25.25■■□□□ 1.63
PMPCA-212ENST00000622209 MPHOSPH10O00566 681 aaKnown RBP25.25■■□□□ 1.63
PMPCA-212ENST00000622209 EVI5O60447 810 aa25.25■■□□□ 1.63
PMPCA-212ENST00000622209 CYP2D6P10635 497 aa25.25■■□□□ 1.63
PMPCA-212ENST00000622209 CAPN2P17655 700 aa25.25■■□□□ 1.63
PMPCA-212ENST00000622209 GUCY1A2P33402 732 aa25.25■■□□□ 1.63
PMPCA-212ENST00000622209 SEPT2Q15019 361 aa25.25■■□□□ 1.63
PMPCA-212ENST00000622209 CATSPERGQ6ZRH7 1159 aa25.25■■□□□ 1.63
PMPCA-212ENST00000622209 SOCS4Q8WXH5 440 aa25.25■■□□□ 1.63
PMPCA-212ENST00000622209 STRBPQ96SI9 672 aaKnown RBP25.25■■□□□ 1.63
PMPCA-212ENST00000622209 CWC22Q9HCG8 908 aaKnown RBP25.25■■□□□ 1.63
PMPCA-212ENST00000622209 DCP1AQ9NPI6 582 aaPredicted RBP25.25■■□□□ 1.63
PMPCA-212ENST00000622209 VCAM1P19320 739 aa25.24■■□□□ 1.63
PMPCA-212ENST00000622209 GABPAQ06546 454 aa25.24■■□□□ 1.63
PMPCA-212ENST00000622209 ZMYM1Q5SVZ6 1142 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms