RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 TLR3O15455 904 aaKnown RBP13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 PRPSAP1Q14558 356 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 CNNM4Q6P4Q7 775 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 SDCCAG3Q96C92 435 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 SPTLC2O15270 562 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 ZNF853P0CG23 659 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 CDC37L1Q7L3B6 337 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 ELMOD1Q8N336 334 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 MCUQ8NE86 351 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 MRPL44Q9H9J2 332 aaKnown RBP13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 ALAS1P13196 640 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 KRT15P19012 456 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 KCNG1Q9UIX4 513 aa13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 CPSF3Q9UKF6 684 aaKnown RBP13.42□□□□□ -0.26
SLC6A6-210ENST00000622186 RHOXF2BP0C7M4 288 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 UBE2HP62256 183 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 RHOXF2Q9BQY4 288 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 PPP1R12CQ9BZL4 782 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 CAVIN2O95810 425 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 HPDP32754 393 aaPredicted RBP13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 FBXO31Q5XUX0 539 aaPredicted RBP13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 PHLDB2Q86SQ0 1253 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 RETREG2Q8NC44 543 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 LIG4P49917 911 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 GIMAP6Q6P9H5 292 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 RBM8AQ9Y5S9 174 aaKnown RBP13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 DAPK1P53355 1430 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 BCRP11274 1271 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 LRMPQ12912 555 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 SLC12A1Q13621 1099 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 RBSNQ9H1K0 784 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 GRM8O00222 908 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 PCK1P35558 622 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 HP1BP3Q5SSJ5 553 aaPredicted RBP13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 PDZD8Q8NEN9 1154 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 DNAJC7Q99615 494 aa13.41□□□□□ -0.26
SLC6A6-210ENST00000622186 MAFGO15525 162 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 KCTD2Q14681 263 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 PUM3Q15397 648 aaKnown RBP13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 PIK3AP1Q6ZUJ8 805 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 TPH2Q8IWU9 490 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 RAD51AP2Q09MP3 1159 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 TTC1Q99614 292 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 SLC12A6Q9UHW9 1150 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 PAXBP1Q9Y5B6 917 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 GBP1P32455 592 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 COG7P83436 770 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 ARMC9Q7Z3E5 817 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 ACEP12821 1306 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 SZRD1Q7Z422 152 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 DOLKQ9UPQ8 538 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 SKILP12757 684 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 ARHGAP24Q8N264 748 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 CDC26Q8NHZ8 85 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 DPF3Q92784 378 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 BCAP29Q9UHQ4 241 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
SLC6A6-210ENST00000622186 LMNB1P20700 586 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 C9orf84Q5VXU9 1444 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 ECE1P42892 770 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 CCDC93Q567U6 631 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 SUCLA2Q9P2R7 463 aaPredicted RBP13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 KLF15Q9UIH9 416 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 PHEXP78562 749 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 HAUS1Q96CS2 278 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 AATFQ9NY61 560 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■□ 24.3
SLC6A6-210ENST00000622186 USH1CQ9Y6N9 552 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 PPP1R2P41236 205 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 RAB44Q7Z6P3 723 aaPredicted RBP13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 METTL14Q9HCE5 456 aaKnown RBP13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 AKT3Q9Y243 479 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 PPFIA4O75335 1185 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 PYGLP06737 847 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 ARHGAP44Q17R89 818 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 RNF219Q5W0B1 726 aaPredicted RBP13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 FAM180AQ6UWF9 173 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 RSRC1Q96IZ7 334 aaKnown RBP13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 NR1H4Q96RI1 486 aaPredicted RBP13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 ANXA13P27216 316 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 BLVRAP53004 296 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 MYSM1Q5VVJ2 828 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 CHURC1Q8WUH1 139 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
SLC6A6-210ENST00000622186 MYL3P08590 195 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 MCF2L2Q86YR7 1114 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 FGD4Q96M96 766 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 KRT12Q99456 494 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms