RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TNK2Q07912 1038 aa7.72□□□□□ -1.17
BRCA1-229ENST00000621897 LRRN4CLQ8ND94 238 aa7.72□□□□□ -1.17
BRCA1-229ENST00000621897 PI4K2BQ8TCG2 481 aa7.72□□□□□ -1.17
BRCA1-229ENST00000621897 Q96M66 194 aa7.72□□□□□ -1.17
BRCA1-229ENST00000621897 LRRC3Q9BY71 257 aa7.72□□□□□ -1.17
BRCA1-229ENST00000621897 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
BRCA1-229ENST00000621897 RC3H2Q9HBD1 1191 aaKnown RBP7.72□□□□□ -1.17
BRCA1-229ENST00000621897 BRMS1Q9HCU9 246 aa7.72□□□□□ -1.17
BRCA1-229ENST00000621897 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-229ENST00000621897 PAPLNO95428 1278 aa7.71□□□□□ -1.18
BRCA1-229ENST00000621897 CYP7A1P22680 504 aa7.71□□□□□ -1.18
BRCA1-229ENST00000621897 YARSP54577 528 aaKnown RBP7.71□□□□□ -1.18
BRCA1-229ENST00000621897 ZP2Q05996 745 aa7.71□□□□□ -1.18
BRCA1-229ENST00000621897 SLFN12Q8IYM2 578 aa7.71□□□□□ -1.18
BRCA1-229ENST00000621897 UBP1Q9NZI7 540 aa7.71□□□□□ -1.18
BRCA1-229ENST00000621897 PAX4O43316 350 aa7.7□□□□□ -1.18
BRCA1-229ENST00000621897 ETV3P41162 512 aa7.7□□□□□ -1.18
BRCA1-229ENST00000621897 KIR3DL1P43629 444 aa7.7□□□□□ -1.18
BRCA1-229ENST00000621897 CWF19L2Q2TBE0 894 aaKnown RBP7.7□□□□□ -1.18
BRCA1-229ENST00000621897 BAHD1Q8TBE0 780 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-229ENST00000621897 COX4I2Q96KJ9 171 aa7.7□□□□□ -1.18
BRCA1-229ENST00000621897 BCL11AQ9H165 835 aa7.7□□□□□ -1.18
BRCA1-229ENST00000621897 WASH4PA8MWX3 477 aa7.69□□□□□ -1.18
BRCA1-229ENST00000621897 FANCCQ00597 558 aa7.69□□□□□ -1.18
BRCA1-229ENST00000621897 SLC23A3Q6PIS1 610 aa7.69□□□□□ -1.18
BRCA1-229ENST00000621897 FMNL2Q96PY5 1086 aa7.69□□□□□ -1.18
BRCA1-229ENST00000621897 CARS2Q9HA77 564 aaKnown RBP7.69□□□□□ -1.18
BRCA1-229ENST00000621897 RNF114Q9Y508 228 aa7.69□□□□□ -1.18
BRCA1-229ENST00000621897 PCDHB14Q9Y5E9 798 aa7.69□□□□□ -1.18
BRCA1-229ENST00000621897 ROBO2Q9HCK4 1378 aa7.69□□□□□ -1.18
BRCA1-229ENST00000621897 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
BRCA1-229ENST00000621897 RECKO95980 971 aa7.68□□□□□ -1.18
BRCA1-229ENST00000621897 ZNF76P36508 570 aa7.68□□□□□ -1.18
BRCA1-229ENST00000621897 SEZ6Q53EL9 994 aa7.68□□□□□ -1.18
BRCA1-229ENST00000621897 UBE2FQ969M7 185 aa7.68□□□□□ -1.18
BRCA1-229ENST00000621897 ZSWIM5Q9P217 1185 aa7.68□□□□□ -1.18
BRCA1-229ENST00000621897 SLC22A31A6NKX4 558 aa7.67□□□□□ -1.18
BRCA1-229ENST00000621897 LRRN2O75325 713 aa7.67□□□□□ -1.18
BRCA1-229ENST00000621897 JUNBP17275 347 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-229ENST00000621897 EAF1Q96JC9 268 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-229ENST00000621897 KIF2CQ99661 725 aa7.67□□□□□ -1.18
BRCA1-229ENST00000621897 PCDHGB7Q9Y5F8 929 aa7.67□□□□□ -1.18
BRCA1-229ENST00000621897 ATE1O95260 518 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 CLCQ05315 142 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 ZNF394Q53GI3 561 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 ARSHQ5FYA8 562 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 THAP5Q7Z6K1 395 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 ATG4DQ86TL0 474 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-229ENST00000621897 PHACTR4Q8IZ21 702 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 DTWD2Q8NBA8 298 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 PIWIL2Q8TC59 973 aaKnown RBP7.66□□□□□ -1.18
BRCA1-229ENST00000621897 CCDC74BQ96LY2 380 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 DUSP15Q9H1R2 295 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-229ENST00000621897 LMCD1Q9NZU5 365 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 CARMIL2Q6F5E8 1435 aa7.66□□□□□ -1.18
BRCA1-229ENST00000621897 TNNI2P48788 182 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 APOBRQ0VD83 1088 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 OVOS1Q6IE37 1185 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 GK5Q6ZS86 529 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 USP48Q86UV5 1035 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 RNF141Q8WVD5 230 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 KREMEN1Q96MU8 473 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 KRTAP4-12Q9BQ66 201 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 SPON2Q9BUD6 331 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 NT5C1AQ9BXI3 368 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 EHMT1Q9H9B1 1298 aa7.65□□□□□ -1.18
BRCA1-229ENST00000621897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-229ENST00000621897 UBOX5O94941 541 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 ESR1P03372 595 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 SRFP11831 508 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 POLR2BP30876 1174 aaKnown RBP7.64□□□□□ -1.19
BRCA1-229ENST00000621897 KIAA0825Q8IV33 1275 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 SLITRK4Q8IW52 837 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 ASIC4Q96FT7 647 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 ANTXR1Q9H6X2 564 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 METTL5Q9NRN9 209 aaKnown RBP7.64□□□□□ -1.19
BRCA1-229ENST00000621897 C19orf73Q9NVV2 129 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 GMIPQ9P107 970 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 CTNND2Q9UQB3 1225 aa7.64□□□□□ -1.19
BRCA1-229ENST00000621897 RGS13O14921 159 aa7.63□□□□□ -1.19
BRCA1-229ENST00000621897 MCM4P33991 863 aa7.63□□□□□ -1.19
BRCA1-229ENST00000621897 FLAD1Q8NFF5 587 aa7.63□□□□□ -1.19
BRCA1-229ENST00000621897 NKD1Q969G9 470 aa7.63□□□□□ -1.19
BRCA1-229ENST00000621897 VWCEQ96DN2 955 aa7.63□□□□□ -1.19
BRCA1-229ENST00000621897 BIN1O00499 593 aa7.62□□□□□ -1.19
BRCA1-229ENST00000621897 RAG1P15918 1043 aa7.62□□□□□ -1.19
BRCA1-229ENST00000621897 VAMP1P23763 118 aa7.62□□□□□ -1.19
BRCA1-229ENST00000621897 TPP2P29144 1249 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-229ENST00000621897 GBP1P32455 592 aa7.62□□□□□ -1.19
BRCA1-229ENST00000621897 RACK1P63244 317 aaKnown RBP7.62□□□□□ -1.19
BRCA1-229ENST00000621897 GAB4Q2WGN9 574 aa7.62□□□□□ -1.19
BRCA1-229ENST00000621897 REXO1Q8N1G1 1221 aaKnown RBP7.62□□□□□ -1.19
BRCA1-229ENST00000621897 RNF34Q969K3 372 aa7.62□□□□□ -1.19
BRCA1-229ENST00000621897 ATG4CQ96DT6 458 aa7.62□□□□□ -1.19
BRCA1-229ENST00000621897 GPR62Q9BZJ7 368 aa7.62□□□□□ -1.19
BRCA1-229ENST00000621897 SHISA3A0PJX4 238 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 UNCXA6NJT0 531 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 MLECQ14165 292 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 CDCP2Q5VXM1 449 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms