RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CHRNA5P30532 468 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ADD2P35612 726 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 CYLC1P35663 651 aaPredicted RBP10.38□□□□□ -0.75
GGA3-223ENST00000621870 RAPGEF1Q13905 1077 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ADCK5Q3MIX3 580 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ARHGEF16Q5VV41 709 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 CCDC113Q9H0I3 377 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 SPON1Q9HCB6 807 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ZNF277Q9NRM2 450 aaPredicted RBP10.38□□□□□ -0.75
GGA3-223ENST00000621870 RNF216Q9NWF9 866 aaPredicted RBP10.38□□□□□ -0.75
GGA3-223ENST00000621870 SHROOM2Q13796 1616 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 NEMFO60524 1076 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 CASQ1P31415 396 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ACTN2P35609 894 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 MECOMQ03112 1051 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 UBXN1Q04323 297 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 SIRT2Q8IXJ6 389 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 CCDC102AQ96A19 550 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 ZNF830Q96NB3 372 aaPredicted RBP10.38□□□□□ -0.75
GGA3-223ENST00000621870 TDRD3Q9H7E2 651 aaKnown RBP10.38□□□□□ -0.75
GGA3-223ENST00000621870 SLC5A4Q9NY91 659 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 RNF181Q9P0P0 153 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 MRPL11Q9Y3B7 192 aaKnown RBP10.38□□□□□ -0.75
GGA3-223ENST00000621870 OVOS2A0A0G2JMS6 1433 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 OVOS2A0A0J9YW53 1432 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 OVOS2Q6IE36 1432 aa10.38□□□□□ -0.75
GGA3-223ENST00000621870 SLC16A2P36021 539 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 KIF22Q14807 665 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 DEFB132Q7Z7B7 95 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 GTF3C6Q969F1 213 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 CCDC97Q96F63 343 aaPredicted RBP10.37□□□□□ -0.75
GGA3-223ENST00000621870 FRMD4BQ9Y2L6 1034 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.37□□□□□ -0.755e-7■■■□□ 15.3
GGA3-223ENST00000621870 KCTD1Q719H9 257 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 DPP9Q86TI2 863 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 BLIDQ8IZY5 108 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 NEK11Q8NG66 645 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 MAP4K1Q92918 833 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 ZNF274Q96GC6 653 aaPredicted RBP10.37□□□□□ -0.75
GGA3-223ENST00000621870 CCDC42Q96M95 316 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 KANSL2Q9H9L4 492 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 CD209Q9NNX6 404 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 TPCN1Q9ULQ1 816 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 POLA2Q14181 598 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 AOC3Q16853 763 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 MYSM1Q5VVJ2 828 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 NELFCDQ8IXH7 590 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 TSPYL1Q9H0U9 437 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 IFNKQ9P0W0 207 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 PI4KBQ9UBF8 816 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 PCDHA12Q9UN75 941 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 PTPRMP28827 1452 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 ABCA9Q8IUA7 1624 aa10.37□□□□□ -0.75
GGA3-223ENST00000621870 SKILP12757 684 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 XRCC6P12956 609 aaKnown RBP eCLIP10.36□□□□□ -0.751e-6■■■■□ 19.8
GGA3-223ENST00000621870 SCG2P13521 617 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 DNM2P50570 870 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 TBC1D8BQ0IIM8 1120 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 STRN3Q13033 797 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 KCTD2Q14681 263 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 MYCT1Q8N699 235 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 RNF169Q8NCN4 708 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 LEO1Q8WVC0 666 aaPredicted RBP10.36□□□□□ -0.75
GGA3-223ENST00000621870 PIH1D3Q9NQM4 214 aaKnown RBP10.36□□□□□ -0.75
GGA3-223ENST00000621870 CDC42BPGQ6DT37 1551 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
GGA3-223ENST00000621870 CETN3O15182 167 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 POLR2MP0CAP2 368 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 UBXN2AP68543 259 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 METTL13Q8N6R0 699 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 VPS16Q9H269 839 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 SUGCTQ9HAC7 445 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 A0A0G2JLW4 131 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 CUTAO60888 179 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 MCAMP43121 646 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 SLFNL1Q499Z3 407 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 AMNQ9BXJ7 453 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 CEP83Q9Y592 693 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 ADGRB3O60242 1522 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 FAM196BA6NMK8 535 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 EEF2P13639 858 aaKnown RBP10.36□□□□□ -0.75
GGA3-223ENST00000621870 MYL5Q02045 173 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 UVSSAQ2YD98 709 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 GPATCH4Q5T3I0 446 aaKnown RBP10.36□□□□□ -0.75
GGA3-223ENST00000621870 PODNQ7Z5L7 613 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 CABP7Q86V35 215 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 RDH13Q8NBN7 331 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 DHX36Q9H2U1 1008 aaKnown RBP10.36□□□□□ -0.75
GGA3-223ENST00000621870 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
GGA3-223ENST00000621870 SPATA31A1Q5TZJ5 1347 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 IQGAP3Q86VI3 1631 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 USP31Q70CQ4 1352 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 EIF3JO75822 258 aaKnown RBP10.35□□□□□ -0.75
GGA3-223ENST00000621870 ZNF202O95125 648 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 CYP4A11Q02928 519 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 SNW1Q13573 536 aaKnown RBP10.35□□□□□ -0.75
GGA3-223ENST00000621870 APOA5Q6Q788 366 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 ARMC9Q7Z3E5 817 aa10.35□□□□□ -0.75
GGA3-223ENST00000621870 MIER3Q7Z3K6 550 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms