RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 ANKS1AQ92625 1134 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 CEP95Q96GE4 821 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 CCDC17Q96LX7 622 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 TEPSINQ96N21 525 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 LLPHQ9BRT6 129 aaKnown RBP12.47□□□□□ -0.41
CPNE3-212ENST00000621783 SCN4AP35499 1836 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 GLTPD2A6NH11 291 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 MPHOSPH10O00566 681 aaKnown RBP12.46□□□□□ -0.41
CPNE3-212ENST00000621783 CDC27P30260 824 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 NOVP48745 357 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 CERKLQ49MI3 558 aaPredicted RBP12.46□□□□□ -0.41
CPNE3-212ENST00000621783 CATIPQ7Z7H3 387 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 CLEC10AQ8IUN9 316 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 SMARCC2Q8TAQ2 1214 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 NUP133Q8WUM0 1156 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 KAT14Q9H8E8 782 aa12.46□□□□□ -0.41
CPNE3-212ENST00000621783 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPNE3-212ENST00000621783 PITPNM2Q9BZ72 1349 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 SSC5DA1L4H1 1573 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
CPNE3-212ENST00000621783 TBC1D12O60347 775 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 GDF11O95390 407 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 RRP1BQ14684 758 aaKnown RBP12.45□□□□□ -0.42
CPNE3-212ENST00000621783 RTN1Q16799 776 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 SHROOM1Q2M3G4 852 aaPredicted RBP12.45□□□□□ -0.42
CPNE3-212ENST00000621783 PNMA1Q8ND90 353 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 DEFB129Q9H1M3 183 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
CPNE3-212ENST00000621783 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 STX8Q9UNK0 236 aa12.45□□□□□ -0.42
CPNE3-212ENST00000621783 ATAD5Q96QE3 1844 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 CPLX1O14810 134 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 CALM1P0DP23 149 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 CALM2P0DP24 149 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 CALM3P0DP25 149 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 TOP1P11387 765 aaKnown RBP12.44□□□□□ -0.42
CPNE3-212ENST00000621783 EPHX2P34913 555 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 HMGN5P82970 282 aaKnown RBP12.44□□□□□ -0.42
CPNE3-212ENST00000621783 TROAPQ12815 778 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 ABCB5Q2M3G0 1257 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 TMEM179Q6ZVK1 233 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 PPP2R3BQ9Y5P8 575 aa12.44□□□□□ -0.42
CPNE3-212ENST00000621783 MYH4Q9Y623 1939 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 CDKL5O76039 1030 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 TTLL1O95922 423 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 GUCY1A2P33402 732 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
CPNE3-212ENST00000621783 JAG1P78504 1218 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 NUCB2P80303 420 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 PKP1Q13835 747 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 NTRK3Q16288 839 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 CPLX2Q6PUV4 134 aaKnown RBP12.43□□□□□ -0.42
CPNE3-212ENST00000621783 USP50Q70EL3 339 aaPredicted RBP12.43□□□□□ -0.42
CPNE3-212ENST00000621783 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
CPNE3-212ENST00000621783 FANCBQ8NB91 859 aa12.43□□□□□ -0.42
CPNE3-212ENST00000621783 RBM28Q9NW13 759 aaKnown RBP12.43□□□□□ -0.42
CPNE3-212ENST00000621783 DOCK1Q14185 1865 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 STK36Q9NRP7 1315 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 CCDC196A0A1B0GTZ2 297 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 PPFIA3O75145 1194 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 GH2P01242 217 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 ICA1Q05084 483 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 GRM4Q14833 912 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 SEPT2Q15019 361 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 RAB3GAP1Q15042 981 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 PPP2R5BQ15173 497 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 NBPF12Q5TAG4 269 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-212ENST00000621783 RASGRP2Q7LDG7 609 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 FAM184AQ8NB25 1140 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 CTCFLQ8NI51 663 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-212ENST00000621783 CABP5Q9NP86 173 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 ZBTB21Q9ULJ3 1066 aa12.42□□□□□ -0.42
CPNE3-212ENST00000621783 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 PAPPA2Q9BXP8 1791 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 ADM5C9JUS6 153 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 PLEKHA8P1O95397 391 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 BRD1O95696 1058 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 EEF2P13639 858 aaKnown RBP12.41□□□□□ -0.42
CPNE3-212ENST00000621783 FDPSP14324 419 aaKnown RBP12.41□□□□□ -0.42
CPNE3-212ENST00000621783 IFNAR1P17181 557 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 SYT1P21579 422 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 CAP2P40123 477 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 ATP2B2Q01814 1243 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 TMTC3Q6ZXV5 915 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 PHKBQ93100 1093 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 DCPSQ96C86 337 aaKnown RBP12.41□□□□□ -0.42
CPNE3-212ENST00000621783 MAP3K14Q99558 947 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
CPNE3-212ENST00000621783 KANSL2Q9H9L4 492 aa12.41□□□□□ -0.42
CPNE3-212ENST00000621783 ORC3Q9UBD5 711 aaPredicted RBP12.41□□□□□ -0.42
CPNE3-212ENST00000621783 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms