RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 MYL5Q02045 173 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 LRRC47Q8N1G4 583 aaKnown RBP10.29□□□□□ -0.76
GGA3-222ENST00000621217 GPKOWQ92917 476 aaPredicted RBP eCLIP10.29□□□□□ -0.76
GGA3-222ENST00000621217 UBA5Q9GZZ9 404 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 BSDC1Q9NW68 430 aaPredicted RBP10.29□□□□□ -0.76
GGA3-222ENST00000621217 PXDNLA1KZ92 1463 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 FANCLQ9NW38 375 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 SCAF8Q9UPN6 1271 aaKnown RBP10.28□□□□□ -0.76
GGA3-222ENST00000621217 NFE2L3Q9Y4A8 694 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 DCCP43146 1447 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 ADKP55263 362 aaKnown RBP10.28□□□□□ -0.76
GGA3-222ENST00000621217 CT47A1Q5JQC4 288 aaPredicted RBP10.28□□□□□ -0.76
GGA3-222ENST00000621217 SMYD4Q8IYR2 804 aaPredicted RBP10.28□□□□□ -0.76
GGA3-222ENST00000621217 NLGN1Q8N2Q7 840 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 KIAA1524Q8TCG1 905 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 FAM84BQ96KN1 310 aaPredicted RBP10.28□□□□□ -0.76
GGA3-222ENST00000621217 BCS1LQ9Y276 419 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 MON2Q7Z3U7 1717 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 UTYO14607 1347 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 CLRN2A0PK11 232 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 CSF1RP07333 972 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 KRT2P35908 639 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 LONRF3Q496Y0 759 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 C10orf67Q8IYJ2 551 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 FANCBQ8NB91 859 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 PCDHA5Q9Y5H7 936 aa10.28□□□□□ -0.76
GGA3-222ENST00000621217 ZMYM6O95789 1325 aa10.27□□□□□ -0.76
GGA3-222ENST00000621217 FRMPD2Q68DX3 1309 aaPredicted RBP10.27□□□□□ -0.76
GGA3-222ENST00000621217 RAD17O75943 681 aa10.27□□□□□ -0.76
GGA3-222ENST00000621217 YEATS4O95619 227 aa10.27□□□□□ -0.76
GGA3-222ENST00000621217 NTSR2O95665 410 aa10.27□□□□□ -0.76
GGA3-222ENST00000621217 KIF4BQ2VIQ3 1234 aa10.27□□□□□ -0.76
GGA3-222ENST00000621217 LETM2Q2VYF4 491 aa10.27□□□□□ -0.76
GGA3-222ENST00000621217 XDHP47989 1333 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 USP17L3A6NCW0 530 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 USP17L4A6NCW7 530 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 DEXIO95424 95 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 CHMP4BP1P59074 171 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 TTLL12Q14166 644 aaPredicted RBP10.27□□□□□ -0.77
GGA3-222ENST00000621217 USP17L1Q7RTZ2 530 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 TXNRD3Q86VQ6 643 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 RASGRP4Q8TDF6 673 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 CEP89Q96ST8 783 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 CRACR2AQ9BSW2 395 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 MXD3Q9BW11 206 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 VPS16Q9H269 839 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 RTEL1Q9NZ71 1219 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 TCHHQ07283 1943 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 CLGNO14967 610 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 ZSCAN12O43309 604 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 ZBTB7AO95365 584 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 CHRNA5P30532 468 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 NLRP12P59046 1061 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 TTC31Q49AM3 519 aaPredicted RBP10.27□□□□□ -0.77
GGA3-222ENST00000621217 NOSTRINQ8IVI9 506 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 LRRC8AQ8IWT6 810 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 CCDC12Q8WUD4 166 aaPredicted RBP10.27□□□□□ -0.77
GGA3-222ENST00000621217 JDP2Q8WYK2 163 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 EYA3Q99504 573 aa10.27□□□□□ -0.77
GGA3-222ENST00000621217 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.27□□□□□ -0.77
GGA3-222ENST00000621217 PPEF1O14829 653 aaPredicted RBP10.26□□□□□ -0.77
GGA3-222ENST00000621217 C21orf2O43822 256 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 GUCY1A2P33402 732 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 CASP7P55210 303 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 CCDC178Q5BJE1 867 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 CDHR2Q9BYE9 1310 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 SH2B2O14492 632 aaPredicted RBP10.26□□□□□ -0.77
GGA3-222ENST00000621217 FDPSP14324 419 aaKnown RBP10.26□□□□□ -0.77
GGA3-222ENST00000621217 CASQ1P31415 396 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 EXOSC10Q01780 885 aaKnown RBP10.26□□□□□ -0.77
GGA3-222ENST00000621217 GRAPQ13588 217 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 MB21D2Q8IYB1 491 aaPredicted RBP10.26□□□□□ -0.77
GGA3-222ENST00000621217 CCDC150Q8NCX0 1101 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
GGA3-222ENST00000621217 GRAPLQ8TC17 118 aaPredicted RBP10.26□□□□□ -0.77
GGA3-222ENST00000621217 DESI2Q9BSY9 194 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 KCNF1Q9H3M0 494 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 FAM170AA1A519 330 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 TCP10L2B9ZVM9 353 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 FOXN1O15353 648 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 STAT6P42226 847 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 ELF2Q15723 593 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 ATL3Q6DD88 541 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 PCDHB6Q9Y5E3 794 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 ANTXR2P58335 489 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 STIM1Q13586 685 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 RILPL1Q5EBL4 403 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 CCDC91Q7Z6B0 441 aa10.26□□□□□ -0.77
GGA3-222ENST00000621217 ZSCAN10Q96SZ4 725 aaPredicted RBP10.26□□□□□ -0.77
GGA3-222ENST00000621217 USP27XA6NNY8 438 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 POSTNQ15063 836 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 PRR5LQ6MZQ0 368 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 DEFB132Q7Z7B7 95 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 FCHSD1Q86WN1 690 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 FNBP4Q8N3X1 1017 aaPredicted RBP10.25□□□□□ -0.77
GGA3-222ENST00000621217 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 SMARCC2Q8TAQ2 1214 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 PKD2L1Q9P0L9 805 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 NALCNQ8IZF0 1738 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms