RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 USP17L18D6R9N7 530 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 USP17L22D6RA61 530 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 USP17L17D6RBQ6 530 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 USP17L19D6RCP7 530 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 USP17L20D6RJB6 530 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 USP17L24Q0WX57 530 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 Q3C1V9 767 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 C12orf60Q5U649 245 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 AMOTL1Q8IY63 956 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 KBTBD3Q8NAB2 608 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 TXNRD2Q9NNW7 524 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 SWAP70Q9UH65 585 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 GJD2Q9UKL4 321 aa24.69■■□□□ 1.54
SMC6-210ENST00000621152 KIAA0100Q14667 2235 aaKnown RBP24.69■■□□□ 1.54
SMC6-210ENST00000621152 CYP2D7A0A087X1C5 515 aa24.68■■□□□ 1.54
SMC6-210ENST00000621152 MGAMO43451 1857 aa24.68■■□□□ 1.54
SMC6-210ENST00000621152 SMIM22K7EJ46 135 aa24.67■■□□□ 1.54
SMC6-210ENST00000621152 GJB1P08034 283 aa24.67■■□□□ 1.54
SMC6-210ENST00000621152 CATSPERGQ6ZRH7 1159 aa24.67■■□□□ 1.54
SMC6-210ENST00000621152 NKX2-3Q8TAU0 364 aa24.67■■□□□ 1.54
SMC6-210ENST00000621152 STRBPQ96SI9 672 aaKnown RBP24.67■■□□□ 1.54
SMC6-210ENST00000621152 PAGR1Q9BTK6 254 aa24.67■■□□□ 1.54
SMC6-210ENST00000621152 UNC93B1Q9H1C4 597 aa24.67■■□□□ 1.54
SMC6-210ENST00000621152 RNF113AO15541 343 aaKnown RBP24.66■■□□□ 1.54
SMC6-210ENST00000621152 INHAP05111 366 aa24.66■■□□□ 1.54
SMC6-210ENST00000621152 CDK8P49336 464 aa24.66■■□□□ 1.54
SMC6-210ENST00000621152 CCAR1Q8IX12 1150 aaKnown RBP24.66■■□□□ 1.54
SMC6-210ENST00000621152 GTF3C2Q8WUA4 911 aaPredicted RBP24.66■■□□□ 1.54
SMC6-210ENST00000621152 A0A1W2PRG0 241 aa24.65■■□□□ 1.54
SMC6-210ENST00000621152 GJA8P48165 433 aa24.65■■□□□ 1.54
SMC6-210ENST00000621152 ERVK-9P63128 1117 aa24.65■■□□□ 1.54
SMC6-210ENST00000621152 ERVK-24P63145 666 aa24.65■■□□□ 1.54
SMC6-210ENST00000621152 CTR9Q6PD62 1173 aa24.65■■□□□ 1.54
SMC6-210ENST00000621152 POTEEQ6S8J3 1075 aa24.65■■□□□ 1.54
SMC6-210ENST00000621152 TMEM179Q6ZVK1 233 aa24.65■■□□□ 1.54
SMC6-210ENST00000621152 RBBP6Q7Z6E9 1792 aaKnown RBP24.65■■□□□ 1.54
SMC6-210ENST00000621152 ERC2O15083 957 aa24.64■■□□□ 1.54
SMC6-210ENST00000621152 AKR1B1P15121 316 aa24.64■■□□□ 1.54
SMC6-210ENST00000621152 VCAM1P19320 739 aa24.64■■□□□ 1.54
SMC6-210ENST00000621152 OTUD7AQ8TE49 926 aaPredicted RBP24.64■■□□□ 1.54
SMC6-210ENST00000621152 OSBP2Q969R2 916 aa24.64■■□□□ 1.54
SMC6-210ENST00000621152 CCDC17Q96LX7 622 aa24.64■■□□□ 1.54
SMC6-210ENST00000621152 ZBTB47Q9UFB7 747 aaPredicted RBP24.64■■□□□ 1.54
SMC6-210ENST00000621152 CENPFP49454 3210 aa24.64■■□□□ 1.53
SMC6-210ENST00000621152 TTC41PQ6P2S7 1318 aa24.63■■□□□ 1.53
SMC6-210ENST00000621152 CYP2B6P20813 491 aa24.63■■□□□ 1.53
SMC6-210ENST00000621152 MAPK4P31152 587 aa24.63■■□□□ 1.53
SMC6-210ENST00000621152 ANKRD45Q5TZF3 282 aa24.63■■□□□ 1.53
SMC6-210ENST00000621152 APPBP2Q92624 585 aa24.63■■□□□ 1.53
SMC6-210ENST00000621152 SHISA4Q96DD7 197 aa24.63■■□□□ 1.53
SMC6-210ENST00000621152 RPAP3Q9H6T3 665 aaPredicted RBP24.63■■□□□ 1.53
SMC6-210ENST00000621152 RABGAP1Q9Y3P9 1069 aa24.63■■□□□ 1.53
SMC6-210ENST00000621152 NAV1Q8NEY1 1877 aa24.62■■□□□ 1.53
SMC6-210ENST00000621152 SGPL1O95470 568 aa24.62■■□□□ 1.53
SMC6-210ENST00000621152 ZFYP08048 801 aaPredicted RBP24.62■■□□□ 1.53
SMC6-210ENST00000621152 C16orf86Q6ZW13 317 aa24.62■■□□□ 1.53
SMC6-210ENST00000621152 SIAH1Q8IUQ4 282 aa24.62■■□□□ 1.53
SMC6-210ENST00000621152 U2AF1L4Q8WU68 220 aaKnown RBP24.62■■□□□ 1.53
SMC6-210ENST00000621152 NUDT12Q9BQG2 462 aa24.62■■□□□ 1.53
SMC6-210ENST00000621152 PORCNQ9H237 461 aa24.62■■□□□ 1.53
SMC6-210ENST00000621152 GSG1L2A8MUP6 293 aa24.61■■□□□ 1.53
SMC6-210ENST00000621152 GLRX3O76003 335 aaKnown RBP24.61■■□□□ 1.53
SMC6-210ENST00000621152 LRRFIP1Q32MZ4 808 aaKnown RBP24.61■■□□□ 1.53
SMC6-210ENST00000621152 PDE4DIPQ5VU43 2346 aa24.61■■□□□ 1.53
SMC6-210ENST00000621152 DDX60LQ5H9U9 1706 aaKnown RBP24.61■■□□□ 1.53
SMC6-210ENST00000621152 CNMDO75829 334 aa24.6■■□□□ 1.53
SMC6-210ENST00000621152 TFRCP02786 760 aaKnown RBP24.6■■□□□ 1.53
SMC6-210ENST00000621152 PLEKHH3Q7Z736 793 aa24.6■■□□□ 1.53
SMC6-210ENST00000621152 PI4K2BQ8TCG2 481 aa24.6■■□□□ 1.53
SMC6-210ENST00000621152 DEFB118Q96PH6 123 aa24.6■■□□□ 1.53
SMC6-210ENST00000621152 ARHGEF10LQ9HCE6 1279 aa24.6■■□□□ 1.53
SMC6-210ENST00000621152 CWC22Q9HCG8 908 aaKnown RBP24.6■■□□□ 1.53
SMC6-210ENST00000621152 DOCK3Q8IZD9 2030 aa24.6■■□□□ 1.53
SMC6-210ENST00000621152 MINDY4BA8MYZ0 360 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 MX1P20591 662 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 CCNA1P78396 465 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 COG2Q14746 738 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 SBK1Q52WX2 424 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 GIMAP6Q6P9H5 292 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 GPR142Q7Z601 462 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 CLEC10AQ8IUN9 316 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 STK11IPQ8N1F8 1099 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 HOXC10Q9NYD6 342 aa24.59■■□□□ 1.53
SMC6-210ENST00000621152 ARPP21Q9UBL0 812 aaPredicted RBP24.59■■□□□ 1.53
SMC6-210ENST00000621152 GPAA1O43292 621 aa24.58■■□□□ 1.53
SMC6-210ENST00000621152 HMGCRP04035 888 aa24.58■■□□□ 1.53
SMC6-210ENST00000621152 APPP05067 770 aa24.58■■□□□ 1.53
SMC6-210ENST00000621152 ICA1Q05084 483 aa24.58■■□□□ 1.53
SMC6-210ENST00000621152 TRIM32Q13049 653 aa24.58■■□□□ 1.53
SMC6-210ENST00000621152 KIAA1755Q5JYT7 1200 aa24.58■■□□□ 1.53
SMC6-210ENST00000621152 BTBD7Q9P203 1132 aa24.58■■□□□ 1.53
SMC6-210ENST00000621152 TMX2Q9Y320 296 aa24.58■■□□□ 1.53
SMC6-210ENST00000621152 SPDYE16A6NNV3 312 aaPredicted RBP24.57■■□□□ 1.52
SMC6-210ENST00000621152 M0R2C6 588 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 ATP2B2Q01814 1243 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 WDR78Q5VTH9 848 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 LBX2Q6XYB7 198 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 SOCS4Q8WXH5 440 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 GCC1Q96CN9 775 aa24.57■■□□□ 1.52
SMC6-210ENST00000621152 FSD1Q9BTV5 496 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms