RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 EVX2Q03828 476 aa18.46■□□□□ 0.55
MUC1-228ENST00000620103 UBE3CQ15386 1083 aa18.46■□□□□ 0.55
MUC1-228ENST00000620103 GTF3C2Q8WUA4 911 aaPredicted RBP18.46■□□□□ 0.55
MUC1-228ENST00000620103 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.46■□□□□ 0.55
MUC1-228ENST00000620103 ARMT1Q9H993 441 aa18.46■□□□□ 0.55
MUC1-228ENST00000620103 SMARCA5O60264 1052 aaPredicted RBP18.45■□□□□ 0.54
MUC1-228ENST00000620103 USP14P54578 494 aa18.45■□□□□ 0.54
MUC1-228ENST00000620103 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
MUC1-228ENST00000620103 SLFNL1Q499Z3 407 aa18.45■□□□□ 0.54
MUC1-228ENST00000620103 GPRC5AQ8NFJ5 357 aa18.45■□□□□ 0.54
MUC1-228ENST00000620103 ACER1Q8TDN7 264 aa18.45■□□□□ 0.54
MUC1-228ENST00000620103 U2AF1L4Q8WU68 220 aaKnown RBP18.45■□□□□ 0.54
MUC1-228ENST00000620103 GCC1Q96CN9 775 aa18.45■□□□□ 0.54
MUC1-228ENST00000620103 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
MUC1-228ENST00000620103 NAV1Q8NEY1 1877 aa18.45■□□□□ 0.54
MUC1-228ENST00000620103 MBD4O95243 580 aa18.44■□□□□ 0.54
MUC1-228ENST00000620103 CAPN2P17655 700 aa18.44■□□□□ 0.54
MUC1-228ENST00000620103 PAK6Q9NQU5 681 aaPredicted RBP18.44■□□□□ 0.54
MUC1-228ENST00000620103 ATP8A2Q9NTI2 1148 aa18.44■□□□□ 0.54
MUC1-228ENST00000620103 PEX10O60683 326 aa18.44■□□□□ 0.54
MUC1-228ENST00000620103 SGPL1O95470 568 aa18.44■□□□□ 0.54
MUC1-228ENST00000620103 FEZ1Q99689 392 aa18.44■□□□□ 0.54
MUC1-228ENST00000620103 ECHDC1Q9NTX5 307 aa18.44■□□□□ 0.54
MUC1-228ENST00000620103 USP17L15C9J2P7 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 USP17L13C9JLJ4 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 USP17L11C9JVI0 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 USP17L18D6R9N7 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 USP17L22D6RA61 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 USP17L17D6RBQ6 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 USP17L19D6RCP7 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 USP17L20D6RJB6 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 PRKAB2O43741 272 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 CHGBP05060 677 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 CYP2D6P10635 497 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 USP17L24Q0WX57 530 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 Q3C1V9 767 aa18.43■□□□□ 0.54
MUC1-228ENST00000620103 VCAM1P19320 739 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 ERVK-9P63128 1117 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 ERVK-24P63145 666 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 SEPT2Q15019 361 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 LBX2Q6XYB7 198 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 CATSPERGQ6ZRH7 1159 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 SWAP70Q9UH65 585 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 RABGAP1Q9Y3P9 1069 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 HMGCRP04035 888 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 MAPK4P31152 587 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 ZYXQ15942 572 aaKnown RBP18.42■□□□□ 0.54
MUC1-228ENST00000620103 SLC44A5Q8NCS7 719 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 CRISPLD2Q9H0B8 497 aa18.42■□□□□ 0.54
MUC1-228ENST00000620103 XRCC5P13010 732 aaKnown RBP18.41■□□□□ 0.54
MUC1-228ENST00000620103 ZSCAN25Q6NSZ9 544 aa18.41■□□□□ 0.54
MUC1-228ENST00000620103 SOCS4Q8WXH5 440 aa18.41■□□□□ 0.54
MUC1-228ENST00000620103 USP6NLQ92738 828 aa18.41■□□□□ 0.54
MUC1-228ENST00000620103 PORCNQ9H237 461 aa18.41■□□□□ 0.54
MUC1-228ENST00000620103 PLXNB2O15031 1838 aa18.41■□□□□ 0.54
MUC1-228ENST00000620103 A0A1W2PRG0 241 aa18.4■□□□□ 0.54
MUC1-228ENST00000620103 CNMDO75829 334 aa18.4■□□□□ 0.54
MUC1-228ENST00000620103 C12orf60Q5U649 245 aa18.4■□□□□ 0.54
MUC1-228ENST00000620103 DYNLL2Q96FJ2 89 aa18.4■□□□□ 0.54
MUC1-228ENST00000620103 DEFB118Q96PH6 123 aa18.4■□□□□ 0.54
MUC1-228ENST00000620103 PUS7LQ9H0K6 701 aaKnown RBP18.4■□□□□ 0.54
MUC1-228ENST00000620103 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.54
MUC1-228ENST00000620103 TRIB2Q92519 343 aa18.39■□□□□ 0.54
MUC1-228ENST00000620103 NUDT12Q9BQG2 462 aa18.39■□□□□ 0.54
MUC1-228ENST00000620103 PAGR1Q9BTK6 254 aa18.39■□□□□ 0.54
MUC1-228ENST00000620103 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.39■□□□□ 0.54
MUC1-228ENST00000620103 PCDHB15Q9Y5E8 787 aa18.39■□□□□ 0.54
MUC1-228ENST00000620103 USP17L12C9JPN9 530 aa18.39■□□□□ 0.53
MUC1-228ENST00000620103 USP17L21D6R901 530 aa18.39■□□□□ 0.53
MUC1-228ENST00000620103 FARP2O94887 1054 aaPredicted RBP18.39■□□□□ 0.53
MUC1-228ENST00000620103 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
MUC1-228ENST00000620103 GPR142Q7Z601 462 aa18.39■□□□□ 0.53
MUC1-228ENST00000620103 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
MUC1-228ENST00000620103 CCDC136Q96JN2 1154 aa18.39■□□□□ 0.53
MUC1-228ENST00000620103 SMIM22K7EJ46 135 aa18.38■□□□□ 0.53
MUC1-228ENST00000620103 HABP4Q5JVS0 413 aaKnown RBP18.38■□□□□ 0.53
MUC1-228ENST00000620103 MORN1Q5T089 497 aa18.38■□□□□ 0.53
MUC1-228ENST00000620103 SIAH1Q8IUQ4 282 aa18.38■□□□□ 0.53
MUC1-228ENST00000620103 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
MUC1-228ENST00000620103 RPAP3Q9H6T3 665 aaPredicted RBP18.38■□□□□ 0.53
MUC1-228ENST00000620103 RPTORQ8N122 1335 aa18.38■□□□□ 0.53
MUC1-228ENST00000620103 MYH7P12883 1935 aa18.38■□□□□ 0.53
MUC1-228ENST00000620103 SPDYE16A6NNV3 312 aaPredicted RBP18.37■□□□□ 0.53
MUC1-228ENST00000620103 MPHOSPH10O00566 681 aaKnown RBP18.37■□□□□ 0.53
MUC1-228ENST00000620103 CYP2B6P20813 491 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 TRIM32Q13049 653 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 C16orf86Q6ZW13 317 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 PLEKHH3Q7Z736 793 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 GPATCH3Q96I76 525 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 HTATIP2Q9BUP3 242 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 SLC4A4Q9Y6R1 1079 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 CYP2D7A0A087X1C5 515 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 H0YGN5 161 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 TFRCP02786 760 aaKnown RBP18.37■□□□□ 0.53
MUC1-228ENST00000620103 AKR1B1P15121 316 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 CDK8P49336 464 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 CTR9Q6PD62 1173 aa18.37■□□□□ 0.53
MUC1-228ENST00000620103 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
MUC1-228ENST00000620103 STRBPQ96SI9 672 aaKnown RBP18.37■□□□□ 0.53
MUC1-228ENST00000620103 BAZ2AQ9UIF9 1905 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms