RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 GOLGA6L4A6NEF3 574 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 KIF28PB7ZC32 967 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 AKAP17AQ02040 695 aaKnown RBP14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 CCDC183Q5T5S1 534 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 DGKHQ86XP1 1220 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 RBM28Q9NW13 759 aaKnown RBP14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 DEXIO95424 95 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 LIG1P18858 919 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 KIF23Q02241 960 aaPredicted RBP14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 PNMA1Q8ND90 353 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 ZNF396Q96N95 335 aaPredicted RBP14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 USP28Q96RU2 1077 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 TCP11L1Q9NUJ3 509 aa14.72□□□□□ -0.05
TNFAIP3-209ENST00000619035 COL4A5P29400 1685 aa14.71□□□□□ -0.05
TNFAIP3-209ENST00000619035 ELP1O95163 1332 aa14.71□□□□□ -0.05
TNFAIP3-209ENST00000619035 PSMD14O00487 310 aa14.71□□□□□ -0.05
TNFAIP3-209ENST00000619035 CFAP100Q494V2 611 aa14.71□□□□□ -0.05
TNFAIP3-209ENST00000619035 ZFPM1Q8IX07 1006 aa14.71□□□□□ -0.05
TNFAIP3-209ENST00000619035 NIM1KQ8IY84 436 aa14.71□□□□□ -0.05
TNFAIP3-209ENST00000619035 TSPY26PQ9H489 355 aa14.71□□□□□ -0.05
TNFAIP3-209ENST00000619035 FER1L6Q2WGJ9 1857 aa14.71□□□□□ -0.06
TNFAIP3-209ENST00000619035 HLA-DOAP06340 250 aa14.71□□□□□ -0.06
TNFAIP3-209ENST00000619035 MMP14P50281 582 aa14.71□□□□□ -0.06
TNFAIP3-209ENST00000619035 TMTC3Q6ZXV5 915 aa14.71□□□□□ -0.06
TNFAIP3-209ENST00000619035 ZSCAN29Q8IWY8 852 aaPredicted RBP14.71□□□□□ -0.06
TNFAIP3-209ENST00000619035 SERPINB13Q9UIV8 391 aa14.71□□□□□ -0.06
TNFAIP3-209ENST00000619035 KCNJ14Q9UNX9 436 aa14.71□□□□□ -0.06
TNFAIP3-209ENST00000619035 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.06
TNFAIP3-209ENST00000619035 RSBN1LQ6PCB5 846 aaPredicted RBP14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 BRAPQ7Z569 592 aa14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 PIBF1Q8WXW3 757 aa14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 ANKS1AQ92625 1134 aa14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 PGBD1Q96JS3 809 aa14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 RNF26Q9BY78 433 aaPredicted RBP14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 TDRD3Q9H7E2 651 aaKnown RBP14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 RRAGDQ9NQL2 400 aaPredicted RBP14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 BCS1LQ9Y276 419 aa14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 V9GY48 417 aaPredicted RBP14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 MYH15Q9Y2K3 1946 aa14.7□□□□□ -0.06
TNFAIP3-209ENST00000619035 VIL1P09327 827 aaKnown RBP14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 CAMK4Q16566 473 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 NEDD1Q8NHV4 660 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 TMEM47Q9BQJ4 181 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 ZNRF3Q9ULT6 936 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 LTBP3Q9NS15 1303 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 SLURP2P0DP57 97 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 KIF5BP33176 963 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 PTGER2P43116 358 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 GABPAQ06546 454 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 MYSM1Q5VVJ2 828 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 SRBD1Q8N5C6 995 aaKnown RBP14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 CEP95Q96GE4 821 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 IDI2Q9BXS1 227 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 TAOK3Q9H2K8 898 aa14.69□□□□□ -0.06
TNFAIP3-209ENST00000619035 FUT2Q10981 343 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 BICD2Q8TD16 824 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 PRMT6Q96LA8 375 aaPredicted RBP14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 FAM198AQ9UFP1 575 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 FAM196BA6NMK8 535 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 MMP1P03956 469 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 AKR1B1P15121 316 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 EIF6P56537 245 aaKnown RBP14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 SAFBQ15424 915 aaKnown RBP eCLIP14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 ATL3Q6DD88 541 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 OGFOD1Q8N543 542 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 MAP3K14Q99558 947 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 DHX36Q9H2U1 1008 aaKnown RBP14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 VPS54Q9P1Q0 977 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 SWAP70Q9UH65 585 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 HDAC9Q9UKV0 1011 aa14.68□□□□□ -0.06
TNFAIP3-209ENST00000619035 CNTNAP5Q8WYK1 1306 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 DDTLA6NHG4 134 aaPredicted RBP14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 MPHOSPH10O00566 681 aaKnown RBP14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 PRPF3O43395 683 aaKnown RBP14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 PKN1Q16512 942 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 RASGRP2Q7LDG7 609 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 DIS3L2Q8IYB7 885 aaKnown RBP14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 STAG2Q8N3U4 1231 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 AGBL3Q8NEM8 1001 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 CLIC4Q9Y696 253 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 XBP1P17861 261 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 CCDC173Q0VFZ6 552 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 CLEC10AQ8IUN9 316 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 JDP2Q8WYK2 163 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 ANP32BQ92688 251 aaKnown RBP14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 TRIM34Q9BYJ4 488 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 EHD4Q9H223 541 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 DACT1Q9NYF0 836 aa14.67□□□□□ -0.06
TNFAIP3-209ENST00000619035 ARFGEF1Q9Y6D6 1849 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 CLRN2A0PK11 232 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 BTBD18B2RXH4 712 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 GOLGA8HP0CJ92 632 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 SHMT1P34896 483 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 ME1P48163 572 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 GRM4Q14833 912 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 STK38Q15208 465 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 GMLQ99445 158 aa14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.66□□□□□ -0.06
TNFAIP3-209ENST00000619035 RCOR1Q9UKL0 485 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms