RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 DAPK3O43293 454 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 MYL3P08590 195 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 PRR29P0C7W0 189 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 FDX1P10109 184 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 HAUS7Q99871 368 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 SUPT20HL2P0C7V6 817 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 SNAPC2Q13487 334 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 USHBP1Q8N6Y0 703 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 GBA2Q9HCG7 927 aaPredicted RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 NEURL4Q96JN8 1562 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 PDE6AP16499 860 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 PDE6CP51160 858 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 MROH5Q6ZUA9 1318 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 ZFYP08048 801 aaPredicted RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 RABEP1Q15276 862 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 TXNRD1Q16881 649 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 HDDC3Q8N4P3 179 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 RRP36Q96EU6 259 aaKnown RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 PLD1Q13393 1074 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 TCP11Q8WWU5 503 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 ZNF396Q96N95 335 aaPredicted RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 USP31Q70CQ4 1352 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 BTBD8Q5XKL5 378 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 CEP135Q66GS9 1140 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 OTUD6AQ7L8S5 288 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 RNF169Q8NCN4 708 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 SBNO2Q9Y2G9 1366 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 NEFHP12036 1026 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 SKIP12755 728 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 TNFAIP2Q03169 654 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 GTPBP4Q9BZE4 634 aaKnown RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 NAT10Q9H0A0 1025 aaKnown RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 MAGEB6P1A0A0J9YX57 407 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 PRPF6O94906 941 aaKnown RBP3.79□□□□□ -1.8
LPP-220ENST00000617246 BROXQ5VW32 411 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 NRKQ7Z2Y5 1582 aa3.79□□□□□ -1.8
LPP-220ENST00000617246 CTNNA2P26232 953 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 GCKP35557 465 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CAPN9O14815 690 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 BYSLQ13895 437 aaKnown RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 EFCAB14O75071 495 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CYBBP04839 570 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 SSBP05455 408 aaKnown RBP eCLIP3.78□□□□□ -1.8
LPP-220ENST00000617246 ACADMP11310 421 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 HNRNPH2P55795 449 aaKnown RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 GTF2IP78347 998 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 RASGRF1Q13972 1273 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CAGE1Q8TC20 777 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CSGALNACT1Q8TDX6 532 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ESR2Q92731 530 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 MIS12Q9H081 205 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 GCP02774 474 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ARL1P40616 181 aaPredicted RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 MAP2K5Q13163 448 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ENTPD7Q9NQZ7 604 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 LEMD3Q9Y2U8 911 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 TMEM265A0A087WTH1 108 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 SH3BP5O60239 455 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ATP6V1E1P36543 226 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ARL4DP49703 201 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 MAP3K15Q6ZN16 1313 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 UTP6Q9NYH9 597 aaKnown RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 ODF2LQ9ULJ1 636 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CICQ96RK0 1608 aaPredicted RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 PRPF40AO75400 957 aaKnown RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 LRRC69Q6ZNQ3 347 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CFAP57Q96MR6 1250 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 AMNQ9BXJ7 453 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 PAXBP1Q9Y5B6 917 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 COL1A1P02452 1464 aaPredicted RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 C1orf167Q5SNV9 1468 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 IRS4O14654 1257 aaPredicted RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 ARHGEF16Q5VV41 709 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 RAB42Q8N4Z0 105 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 KIAA1524Q8TCG1 905 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 PGBD4Q96DM1 585 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ATP11BQ9Y2G3 1177 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 TBC1D12O60347 775 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ATP2B3Q16720 1220 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 RPF1Q9H9Y2 349 aaKnown RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 IPO11Q9UI26 975 aaKnown RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 NR2E1Q9Y466 385 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 C19orf81C9J6K1 198 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 C4AP0C0L4 1744 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 FLT1P17948 1338 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 PDCP20941 246 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 WASHC5Q12768 1159 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 USH1GQ495M9 461 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 UBE2OQ9C0C9 1292 aaKnown RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 VPS33BQ9H267 617 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 KLHL3Q9UH77 587 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ESYT2A0FGR8 921 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 KRT13P13646 458 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ST8SIA6P61647 398 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 FKBP1BP68106 108 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 KCNV1Q6PIU1 500 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 ACBD3Q9H3P7 528 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 PXDNLA1KZ92 1463 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 SALL3Q9BXA9 1300 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms