RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CUL4AQ13619 759 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 CHRNA2Q15822 529 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 HERC4Q5GLZ8 1057 aaPredicted RBP11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 SPATA1Q5VX52 437 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 BLZF1Q9H2G9 400 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 CCNT1O60563 726 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 LRCH2Q5VUJ6 765 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 NLRC4Q9NPP4 1024 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 MYO1AQ9UBC5 1043 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 JRKLQ9Y4A0 524 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 CD2BP2O95400 341 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 GAS8O95995 478 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 ZNF526Q8TF50 670 aaPredicted RBP11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 XAGE2Q96GT9 111 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 SPTLC3Q9NUV7 552 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 AMFRQ9UKV5 643 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 AGTPBP1Q9UPW5 1226 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 H7C1D1 291 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 TXNDC9O14530 226 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 LUC7L3O95232 432 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 CLTAP09496 248 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 KRT5P13647 590 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 LIN9Q5TKA1 542 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 ANKRD42Q8N9B4 389 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 PLEKHA4Q9H4M7 779 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 MAP3K19Q56UN5 1328 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 KIAA0232Q92628 1395 aa11.81□□□□□ -0.52
CLTCL1-209ENST00000617103 NDUFA8P51970 172 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 PICALMQ13492 652 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 MORC3Q14149 939 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 WDR44Q5JSH3 913 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 KRT25Q7Z3Z0 450 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 NOSTRINQ8IVI9 506 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 SUCLG2Q96I99 432 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 ARMT1Q9H993 441 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 FAN1Q9Y2M0 1017 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 I3L4J1 428 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 TROVE2P10155 538 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 TERF2Q15554 542 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 LGSNQ5TDP6 509 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 MGARPQ8TDB4 240 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 SNX29Q8TEQ0 813 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 MAIP1Q8WWC4 291 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 LRRC59Q96AG4 307 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 ABCC1P33527 1531 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 PLCH2O75038 1416 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 GMNNO75496 209 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 CLCN6P51797 869 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 MAP7Q14244 749 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 AKNAD1Q5T1N1 836 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 TRMT2AQ8IZ69 625 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 PLBD2Q8NHP8 589 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 NUF2Q9BZD4 464 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 KCNK3O14649 394 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 RFC1P35251 1148 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 ZNF804AQ7Z570 1209 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
CLTCL1-209ENST00000617103 TRAPPC8Q9Y2L5 1435 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 KRIT1O00522 736 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 IKBKBO14920 756 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 DYMQ7RTS9 669 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 CABP7Q86V35 215 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 TEX14Q8IWB6 1497 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 PEX19P40855 299 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 SH2D4BQ5SQS7 431 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 SLC35F6Q8N357 371 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 BIRC3Q13489 604 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 ZNF827Q17R98 1081 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 SPATS2LQ9NUQ6 558 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 USH1CQ9Y6N9 552 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 BIVM-ERCC5R4GMW8 1640 aa11.79□□□□□ -0.52
CLTCL1-209ENST00000617103 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 HNRNPH2P55795 449 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 FNBP1Q96RU3 617 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 GLT8D2Q9H1C3 349 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 DENND2AQ9ULE3 1009 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 NDUFB9Q9Y6M9 179 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 A0A0D9SFI3 127 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 GNA14O95837 355 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 ERCC3P19447 782 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 IFT88Q13099 833 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 P3H4Q92791 437 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 PZPP20742 1482 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 BCRP11274 1271 aa11.78□□□□□ -0.52
CLTCL1-209ENST00000617103 IRX4P78413 519 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms