RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 FMR1Q06787 632 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKD1-209ENST00000616995 ZNF512BQ96KM6 892 aaPredicted RBP16.51■□□□□ 0.23
PRKD1-209ENST00000616995 SARM1Q6SZW1 724 aa16.51■□□□□ 0.23
PRKD1-209ENST00000616995 NYXQ9GZU5 481 aa16.51■□□□□ 0.23
PRKD1-209ENST00000616995 N4BP3O15049 544 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 RBM5P52756 815 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRKD1-209ENST00000616995 FILIP1LQ4L180 1135 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 STAG2Q8N3U4 1231 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
PRKD1-209ENST00000616995 MAP3K14Q99558 947 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 UBA7P41226 1012 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 INF2Q27J81 1249 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 ERCC6LQ2NKX8 1250 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 LETM2Q2VYF4 491 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
PRKD1-209ENST00000616995 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 STRCP1A6NGW2 1772 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 WNT7AO00755 349 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 TPM1P09493 284 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 TEX35Q5T0J7 233 aa16.5■□□□□ 0.23
PRKD1-209ENST00000616995 NSUN4Q96CB9 384 aaKnown RBP16.5■□□□□ 0.23
PRKD1-209ENST00000616995 PTPREP23469 700 aa16.49■□□□□ 0.23
PRKD1-209ENST00000616995 KIF5BP33176 963 aa16.49■□□□□ 0.23
PRKD1-209ENST00000616995 PPP1R13BQ96KQ4 1090 aa16.49■□□□□ 0.23
PRKD1-209ENST00000616995 FOXP1Q9H334 677 aaPredicted RBP16.49■□□□□ 0.23
PRKD1-209ENST00000616995 PP2D1A8MPX8 630 aa16.49■□□□□ 0.23
PRKD1-209ENST00000616995 BAG3O95817 575 aa16.49■□□□□ 0.23
PRKD1-209ENST00000616995 STAT6P42226 847 aa16.49■□□□□ 0.23
PRKD1-209ENST00000616995 ZNF771Q7L3S4 317 aaPredicted RBP16.49■□□□□ 0.23
PRKD1-209ENST00000616995 ZSCAN29Q8IWY8 852 aaPredicted RBP16.49■□□□□ 0.23
PRKD1-209ENST00000616995 TEX11Q8IYF3 940 aa16.49■□□□□ 0.23
PRKD1-209ENST00000616995 UBXN4Q92575 508 aa16.49■□□□□ 0.23
PRKD1-209ENST00000616995 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
PRKD1-209ENST00000616995 BAG1Q99933 345 aaPredicted RBP16.49■□□□□ 0.23
PRKD1-209ENST00000616995 FBXO2Q9UK22 296 aaPredicted RBP16.49■□□□□ 0.23
PRKD1-209ENST00000616995 NAPAP54920 295 aa16.48■□□□□ 0.23
PRKD1-209ENST00000616995 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
PRKD1-209ENST00000616995 JAKMIP3Q5VZ66 844 aa16.48■□□□□ 0.23
PRKD1-209ENST00000616995 RIOK1Q9BRS2 568 aaKnown RBP16.48■□□□□ 0.23
PRKD1-209ENST00000616995 RNF26Q9BY78 433 aaPredicted RBP16.48■□□□□ 0.23
PRKD1-209ENST00000616995 ANKRD2Q9GZV1 360 aa16.48■□□□□ 0.23
PRKD1-209ENST00000616995 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
PRKD1-209ENST00000616995 IKQ13123 557 aaPredicted RBP16.48■□□□□ 0.23
PRKD1-209ENST00000616995 NCAPHQ15003 741 aa16.48■□□□□ 0.23
PRKD1-209ENST00000616995 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
PRKD1-209ENST00000616995 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
PRKD1-209ENST00000616995 TAB2Q9NYJ8 693 aa16.48■□□□□ 0.23
PRKD1-209ENST00000616995 COL18A1P39060 1754 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 SCG2P13521 617 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 NCBP1Q09161 790 aaKnown RBP16.47■□□□□ 0.23
PRKD1-209ENST00000616995 E4F1Q66K89 784 aaPredicted RBP16.47■□□□□ 0.23
PRKD1-209ENST00000616995 EPC1Q9H2F5 836 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 USP54Q70EL1 1684 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 CDC25BP30305 580 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 GRIK5Q16478 980 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 ZHX3Q9H4I2 956 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 SIPA1L3O60292 1781 aaPredicted RBP16.47■□□□□ 0.23
PRKD1-209ENST00000616995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.47■□□□□ 0.23
PRKD1-209ENST00000616995 TEX33O43247 280 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 SLU7O95391 586 aaKnown RBP16.47■□□□□ 0.23
PRKD1-209ENST00000616995 CCDC178Q5BJE1 867 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 FRMPD2Q68DX3 1309 aaPredicted RBP16.47■□□□□ 0.23
PRKD1-209ENST00000616995 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 PNPLA7Q6ZV29 1317 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 CLEC10AQ8IUN9 316 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
PRKD1-209ENST00000616995 SPTY2D1Q68D10 685 aaPredicted RBP16.46■□□□□ 0.23
PRKD1-209ENST00000616995 AMIGO3Q86WK7 504 aa16.46■□□□□ 0.23
PRKD1-209ENST00000616995 IGSF22Q8N9C0 903 aa16.46■□□□□ 0.23
PRKD1-209ENST00000616995 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
PRKD1-209ENST00000616995 BMP6P22004 513 aa16.46■□□□□ 0.23
PRKD1-209ENST00000616995 SCNN1DP51172 638 aa16.46■□□□□ 0.23
PRKD1-209ENST00000616995 GTF2IP78347 998 aa16.46■□□□□ 0.23
PRKD1-209ENST00000616995 CARD6Q9BX69 1037 aa16.46■□□□□ 0.23
PRKD1-209ENST00000616995 SRPRBQ9Y5M8 271 aaKnown RBP16.46■□□□□ 0.23
PRKD1-209ENST00000616995 SPATA31A5Q5VU36 1347 aa16.46■□□□□ 0.22
PRKD1-209ENST00000616995 SPATA31A7Q8IWB4 1347 aa16.46■□□□□ 0.22
PRKD1-209ENST00000616995 IDEP14735 1019 aa16.46■□□□□ 0.22
PRKD1-209ENST00000616995 ARHGAP29Q52LW3 1261 aa16.46■□□□□ 0.22
PRKD1-209ENST00000616995 MFSD14BQ5SR56 506 aa16.46■□□□□ 0.22
PRKD1-209ENST00000616995 CLEC4GQ6UXB4 293 aa16.46■□□□□ 0.22
PRKD1-209ENST00000616995 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.22
PRKD1-209ENST00000616995 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 CALM1P0DP23 149 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 CALM2P0DP24 149 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 CALM3P0DP25 149 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 MTF1Q14872 753 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 KANK3Q6NY19 840 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 IQUBQ8NA54 791 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 CASQ1P31415 396 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
PRKD1-209ENST00000616995 IRX2Q9BZI1 471 aaPredicted RBP16.45■□□□□ 0.22
PRKD1-209ENST00000616995 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
PRKD1-209ENST00000616995 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
PRKD1-209ENST00000616995 SEC63Q9UGP8 760 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms