RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 LIG1P18858 919 aa11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 RBM5P52756 815 aaKnown RBP eCLIP11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 AKAP17AQ02040 695 aaKnown RBP11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 PNMA1Q8ND90 353 aa11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 BICD2Q8TD16 824 aa11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 RTEL1Q9NZ71 1219 aa11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 CNTNAP5Q8WYK1 1306 aa11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 COL4A5P29400 1685 aa11.6□□□□□ -0.55
AL353770.3-201ENST00000616253 PRPF3O43395 683 aaKnown RBP11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 MMP1P03956 469 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 POLD1P28340 1107 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 PTGER2P43116 358 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 HDLBPQ00341 1268 aaKnown RBP11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 NFIAQ12857 509 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 MTFR1LQ9H019 292 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 ZNF277Q9NRM2 450 aaPredicted RBP11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 KCNJ14Q9UNX9 436 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 CLIC4Q9Y696 253 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 hCG_1642624A0A1W2PR95 340 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 U2AF2P26368 475 aaKnown RBP eCLIP11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 GABPAQ06546 454 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 PKN1Q16512 942 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 SERPINA10Q9UK55 444 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 STX8Q9UNK0 236 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 SIPA1L1O43166 1804 aa11.59□□□□□ -0.55
AL353770.3-201ENST00000616253 PLIN4Q96Q06 1357 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 KIF5BP33176 963 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 CACNB3P54284 484 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 STK38Q15208 465 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 SAFBQ15424 915 aaKnown RBP eCLIP11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 LARGE2Q8N3Y3 721 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 TMEM47Q9BQJ4 181 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 PANK2Q9BZ23 570 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 SERPINB13Q9UIV8 391 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 V9GY48 417 aaPredicted RBP11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 LETM1O95202 739 aaPredicted RBP11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 YEATS4O95619 227 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 HLA-DOAP06340 250 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 ME1P48163 572 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 NASPP49321 788 aaPredicted RBP11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 TGFB2P61812 414 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 GRM4Q14833 912 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 ANO1Q5XXA6 986 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 DIS3L2Q8IYB7 885 aaKnown RBP11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 LINC00301Q8NCQ3 95 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 TSPY26PQ9H489 355 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 DACT1Q9NYF0 836 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 VPS54Q9P1Q0 977 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 PIM2Q9P1W9 311 aa11.58□□□□□ -0.56
AL353770.3-201ENST00000616253 BTBD18B2RXH4 712 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 XBP1P17861 261 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 NOSTRINQ8IVI9 506 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 ZFPM1Q8IX07 1006 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 KCNG4Q8TDN1 519 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 CEP95Q96GE4 821 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 MAP3K14Q99558 947 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 RBSNQ9H1K0 784 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 NUP62CLQ9H1M0 184 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 MTMR7Q9Y216 660 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 FER1L6Q2WGJ9 1857 aa11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 GREB1LQ9C091 1923 aaPredicted RBP11.57□□□□□ -0.56
AL353770.3-201ENST00000616253 PSMD14O00487 310 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 NR1I2O75469 434 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 RAD17O75943 681 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 AKR1B1P15121 316 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 TCP10Q12799 353 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 SF3A1Q15459 793 aaKnown RBP11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 RSBN1LQ6PCB5 846 aaPredicted RBP11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 STAG2Q8N3U4 1231 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 SGIP1Q9BQI5 828 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 IDI2Q9BXS1 227 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 FOXP1Q9H334 677 aaPredicted RBP11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 DDX19AQ9NUU7 478 aaKnown RBP11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 FAM198AQ9UFP1 575 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 SWAP70Q9UH65 585 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 MAD2L2Q9UI95 211 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 PCDHA7Q9UN72 937 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 MYO3BQ8WXR4 1341 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 SPTLC2O15270 562 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 SHMT1P34896 483 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 C1QTNF8P60827 252 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 NR5A1Q13285 461 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 DALRD3Q5D0E6 543 aaKnown RBP11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 RASGRP2Q7LDG7 609 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 CCAR1Q8IX12 1150 aaKnown RBP11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 PIBF1Q8WXW3 757 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 PHF20Q9BVI0 1012 aa11.56□□□□□ -0.56
AL353770.3-201ENST00000616253 GOLPH3LQ9H4A5 285 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms