RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 BSDC1Q9NW68 430 aaPredicted RBP15.86■□□□□ 0.13
SSBP2-220ENST00000615665 COL15A1P39059 1388 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 PLCD1P51178 756 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 CYP2D7A0A087X1C5 515 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 GSG1L2A8MUP6 293 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 KIF20AO95235 890 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 ZNF34Q8IZ26 560 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 CSRNP2Q9H175 543 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 MAPK8IP1Q9UQF2 711 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 FAM208AQ9UK61 1670 aaKnown RBP15.86■□□□□ 0.13
SSBP2-220ENST00000615665 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 USO1O60763 962 aaKnown RBP15.86■□□□□ 0.13
SSBP2-220ENST00000615665 ANTXR2P58335 489 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 PNMA1Q8ND90 353 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 VPS16Q9H269 839 aa15.86■□□□□ 0.13
SSBP2-220ENST00000615665 TNNI2P48788 182 aa15.85■□□□□ 0.13
SSBP2-220ENST00000615665 SGMS1Q86VZ5 419 aa15.85■□□□□ 0.13
SSBP2-220ENST00000615665 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.133e-6■■□□□ 13.5
SSBP2-220ENST00000615665 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
SSBP2-220ENST00000615665 KIF28PB7ZC32 967 aa15.85■□□□□ 0.13
SSBP2-220ENST00000615665 PAK1Q13153 545 aa15.85■□□□□ 0.13
SSBP2-220ENST00000615665 CCDC40Q4G0X9 1142 aa15.85■□□□□ 0.13
SSBP2-220ENST00000615665 BLZF1Q9H2G9 400 aa15.85■□□□□ 0.13
SSBP2-220ENST00000615665 BICDL2A1A5D9 508 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 POTEB2H3BUK9 544 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
SSBP2-220ENST00000615665 LONRF3Q496Y0 759 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 BLIDQ8IZY5 108 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 PTGDRQ13258 359 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 FEZ1Q99689 392 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 LZTS2Q9BRK4 669 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 USP21Q9UK80 565 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 SLIT3O75094 1523 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 CYLC1P35663 651 aaPredicted RBP15.84■□□□□ 0.13
SSBP2-220ENST00000615665 TDRD12Q587J7 1177 aaKnown RBP15.84■□□□□ 0.13
SSBP2-220ENST00000615665 SYMPKQ92797 1274 aaKnown RBP15.84■□□□□ 0.13
SSBP2-220ENST00000615665 PCDHB6Q9Y5E3 794 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 UBN2Q6ZU65 1347 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 KRT79Q5XKE5 535 aa15.84■□□□□ 0.13
SSBP2-220ENST00000615665 RESP18Q5W5W9 173 aa15.83■□□□□ 0.13
SSBP2-220ENST00000615665 CUL5Q93034 780 aa15.83■□□□□ 0.13
SSBP2-220ENST00000615665 GTPBP4Q9BZE4 634 aaKnown RBP15.83■□□□□ 0.13
SSBP2-220ENST00000615665 CCDC102AQ96A19 550 aa15.83■□□□□ 0.12
SSBP2-220ENST00000615665 LUC7L2Q9Y383 392 aaKnown RBP15.83■□□□□ 0.12
SSBP2-220ENST00000615665 CTAGE9A4FU28 777 aa15.83■□□□□ 0.12
SSBP2-220ENST00000615665 NONOQ15233 471 aaKnown RBP eCLIP15.83■□□□□ 0.126e-7■■■■□ 25.1
SSBP2-220ENST00000615665 ELF2Q15723 593 aa15.83■□□□□ 0.12
SSBP2-220ENST00000615665 KRT25Q7Z3Z0 450 aa15.83■□□□□ 0.12
SSBP2-220ENST00000615665 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
SSBP2-220ENST00000615665 CCNT1O60563 726 aaKnown RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 ADKP55263 362 aaKnown RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 ZNF569Q5MCW4 686 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 EHBP1Q8NDI1 1231 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 BRIP1Q9BX63 1249 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 SPTLC3Q9NUV7 552 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 RGPD1P0DJD0 1748 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 POLR3GO15318 223 aaPredicted RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 PRPF3O43395 683 aaKnown RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 U2AF2P26368 475 aaKnown RBP eCLIP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 SETQ01105 290 aaPredicted RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 MECOMQ03112 1051 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 GPKOWQ92917 476 aaPredicted RBP eCLIP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 MTA3Q9BTC8 594 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 SRP68Q9UHB9 627 aaKnown RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 SRPRBQ9Y5M8 271 aaKnown RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 PNPLA7Q6ZV29 1317 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 ZFP91Q96JP5 570 aaPredicted RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 FUCA2Q9BTY2 467 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 MINPP1Q9UNW1 487 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
SSBP2-220ENST00000615665 GRAMD1CQ8IYS0 662 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 GOLGA1Q92805 767 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 EYA3Q99504 573 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 MAN1B1Q9UKM7 699 aa15.82■□□□□ 0.12
SSBP2-220ENST00000615665 COL5A2P05997 1499 aaPredicted RBP15.81■□□□□ 0.12
SSBP2-220ENST00000615665 TRIM14Q14142 442 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 ARFGAP3Q9NP61 516 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 TAB2Q9NYJ8 693 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 PDE4DQ08499 809 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 CCDC144BQ3MJ40 725 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 NELFBQ8WX92 580 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 GPCPD1Q9NPB8 672 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 OGFRQ9NZT2 677 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 AKR1B10O60218 316 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 ATP1A3P13637 1013 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 EIF6P56537 245 aaKnown RBP15.81■□□□□ 0.12
SSBP2-220ENST00000615665 CEP112Q8N8E3 955 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 IGDCC4Q8TDY8 1250 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 TBC1D22AQ8WUA7 517 aa15.81■□□□□ 0.12
SSBP2-220ENST00000615665 ZNF215Q9UL58 517 aaPredicted RBP15.81■□□□□ 0.12
SSBP2-220ENST00000615665 CTAGE15A4D2H0 777 aa15.8■□□□□ 0.12
SSBP2-220ENST00000615665 CTAGE8P0CG41 777 aa15.8■□□□□ 0.12
SSBP2-220ENST00000615665 IQCB1Q15051 598 aa15.8■□□□□ 0.12
SSBP2-220ENST00000615665 MFSD14BQ5SR56 506 aa15.8■□□□□ 0.12
SSBP2-220ENST00000615665 SPATA1Q5VX52 437 aa15.8■□□□□ 0.12
SSBP2-220ENST00000615665 CTAGE6Q86UF2 777 aa15.8■□□□□ 0.12
SSBP2-220ENST00000615665 CTAGE4Q8IX94 777 aa15.8■□□□□ 0.12
SSBP2-220ENST00000615665 HPS5Q9UPZ3 1129 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms