RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	TTC41P	Q6P2S7	1318 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L12	C9JPN9	530 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L21	D6R901	530 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	APP	P05067	770 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	INHA	P05111	366 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ELN	P15502	786 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	SEPT2	Q15019	361 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	MTFR1	Q15390	333 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	WDR78	Q5VTH9	848 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	TRMT44	Q8IYL2	757 aa	Known RBP	13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	APPBP2	Q92624	585 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	NUDT12	Q9BQG2	462 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ZNF287	Q9HBT7	754 aa		13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.15	□□□□□ -0.3
NPIPB4-222	ENST00000614197	RNF113A	O15541	343 aa	Known RBP	13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	PRKAB2	O43741	272 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	TFRC	P02786	760 aa	Known RBP	13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	HMGCR	P04035	888 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	CYP2D6	P10635	497 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GNAT2	P19087	354 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GJA8	P48165	433 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ERVK-9	P63128	1117 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ERVK-24	P63145	666 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GABPA	Q06546	454 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	AAMP	Q13685	434 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	HTATIP2	Q9BUP3	242 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	NACAP1	Q9BZK3	213 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	TANGO6	Q9C0B7	1094 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	RABGAP1	Q9Y3P9	1069 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	IVNS1ABP	Q9Y6Y0	642 aa		13.14	□□□□□ -0.31
NPIPB4-222	ENST00000614197	VCAM1	P19320	739 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	TDO2	P48775	406 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ATP2B2	Q01814	1243 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ICA1	Q05084	483 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	C12orf60	Q5U649	245 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GIMAP6	Q6P9H5	292 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	CATSPERG	Q6ZRH7	1159 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ACER1	Q8TDN7	264 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	LPAR1	Q92633	364 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	DYNLL2	Q96FJ2	89 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	CRBN	Q96SW2	442 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	FSD1	Q9BTV5	496 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	UNC93B1	Q9H1C4	597 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	MKNK2	Q9HBH9	465 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	HOXC10	Q9NYD6	342 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	PCDHB15	Q9Y5E8	787 aa		13.13	□□□□□ -0.31
NPIPB4-222	ENST00000614197	SLC3A2	P08195	630 aa	Known RBP	13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ZKSCAN1	P17029	563 aa	Predicted RBP	13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	MX1	P20591	662 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	CYP2B6	P20813	491 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	RGS2	P41220	211 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	CDK8	P49336	464 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	SLFNL1	Q499Z3	407 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ANKRD45	Q5TZF3	282 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	TSHZ3	Q63HK5	1081 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	C16orf86	Q6ZW13	317 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	PLEKHH3	Q7Z736	793 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	SLC44A5	Q8NCS7	719 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	U2AF1L4	Q8WU68	220 aa	Known RBP	13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	DPF3	Q92784	378 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	STRBP	Q96SI9	672 aa	Known RBP	13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	PUS7L	Q9H0K6	701 aa	Known RBP	13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	KANSL2	Q9H9L4	492 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	HMX1	Q9NP08	348 aa	Predicted RBP	13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	FOXD4L1	Q9NU39	408 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	RBPJL	Q9UBG7	517 aa		13.12	□□□□□ -0.31
NPIPB4-222	ENST00000614197	FOCAD	Q5VW36	1801 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	MINDY4B	A8MYZ0	360 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	RAD21	O60216	631 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	FARP2	O94887	1054 aa	Predicted RBP	13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	SGPL1	O95470	568 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	COG2	Q14746	738 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	CTR9	Q6PD62	1173 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	DEFB118	Q96PH6	123 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GOPC	Q9HD26	462 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	TXNRD2	Q9NNW7	524 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	LOC285556	D6RIA3	1793 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	PHIP	Q8WWQ0	1821 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ATAD5	Q96QE3	1844 aa		13.11	□□□□□ -0.31
NPIPB4-222	ENST00000614197	MYH1	P12882	1939 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	CYP2D7	A0A087X1C5	515 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GPAA1	O43292	621 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	FLOT1	O75955	427 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	XRCC5	P13010	732 aa	Known RBP	13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	AKR1B1	P15121	316 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	SBK1	Q52WX2	424 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GPR142	Q7Z601	462 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	MB21D1	Q8N884	522 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	RWDD1	Q9H446	243 aa	Predicted RBP	13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GJD2	Q9UKL4	321 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	SIPA1L1	O43166	1804 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	RPTOR	Q8N122	1335 aa		13.1	□□□□□ -0.31
NPIPB4-222	ENST00000614197	ZSWIM8	A7E2V4	1837 aa		13.09	□□□□□ -0.31
NPIPB4-222	ENST00000614197	GUCY1A2	P33402	732 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms