RNA–Protein interactions for RNA: ENST00000613953.4

TPI1-210, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-210ENST00000613953 USP17L13C9JLJ4 530 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 USP17L11C9JVI0 530 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 USP17L18D6R9N7 530 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 USP17L22D6RA61 530 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 USP17L17D6RBQ6 530 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 USP17L19D6RCP7 530 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 USP17L20D6RJB6 530 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 SGPL1O95470 568 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 USP17L24Q0WX57 530 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 DCTPP1Q9H773 170 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 PAK6Q9NQU5 681 aaPredicted RBP28.46■■■□□ 2.15
TPI1-210ENST00000613953 PRKAB2O43741 272 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 HMGCRP04035 888 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 CYP2D6P10635 497 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 VCAM1P19320 739 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 ERVK-9P63128 1117 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 ERVK-24P63145 666 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 POTEEQ6S8J3 1075 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 ECHDC1Q9NTX5 307 aa28.46■■■□□ 2.15
TPI1-210ENST00000613953 CHGBP05060 677 aa28.45■■■□□ 2.14
TPI1-210ENST00000613953 MAPK4P31152 587 aa28.45■■■□□ 2.14
TPI1-210ENST00000613953 SEPT2Q15019 361 aa28.45■■■□□ 2.14
TPI1-210ENST00000613953 PAGR1Q9BTK6 254 aa28.45■■■□□ 2.14
TPI1-210ENST00000613953 SWAP70Q9UH65 585 aa28.45■■■□□ 2.14
TPI1-210ENST00000613953 CEP290O15078 2479 aa28.44■■■□□ 2.14
TPI1-210ENST00000613953 ZSCAN25Q6NSZ9 544 aa28.44■■■□□ 2.14
TPI1-210ENST00000613953 SOCS4Q8WXH5 440 aa28.44■■■□□ 2.14
TPI1-210ENST00000613953 DEFB118Q96PH6 123 aa28.44■■■□□ 2.14
TPI1-210ENST00000613953 MPHOSPH10O00566 681 aaKnown RBP28.43■■■□□ 2.14
TPI1-210ENST00000613953 CAPN2P17655 700 aa28.43■■■□□ 2.14
TPI1-210ENST00000613953 Q3C1V9 767 aa28.43■■■□□ 2.14
TPI1-210ENST00000613953 CATSPERGQ6ZRH7 1159 aa28.43■■■□□ 2.14
TPI1-210ENST00000613953 SLC44A5Q8NCS7 719 aa28.43■■■□□ 2.14
TPI1-210ENST00000613953 FARP2O94887 1054 aaPredicted RBP28.42■■■□□ 2.14
TPI1-210ENST00000613953 NUDT12Q9BQG2 462 aa28.42■■■□□ 2.14
TPI1-210ENST00000613953 PORCNQ9H237 461 aa28.42■■■□□ 2.14
TPI1-210ENST00000613953 RABGAP1Q9Y3P9 1069 aa28.42■■■□□ 2.14
TPI1-210ENST00000613953 PLXNB2O15031 1838 aa28.42■■■□□ 2.14
TPI1-210ENST00000613953 TMEM179Q6ZVK1 233 aa28.41■■■□□ 2.14
TPI1-210ENST00000613953 DYNLL2Q96FJ2 89 aa28.41■■■□□ 2.14
TPI1-210ENST00000613953 GPATCH3Q96I76 525 aa28.41■■■□□ 2.14
TPI1-210ENST00000613953 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.41■■■□□ 2.144e-11■□□□□ 10.8
TPI1-210ENST00000613953 XRCC5P13010 732 aaKnown RBP28.4■■■□□ 2.14
TPI1-210ENST00000613953 CCAR1Q8IX12 1150 aaKnown RBP28.4■■■□□ 2.14
TPI1-210ENST00000613953 TRIB2Q92519 343 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 CRISPLD2Q9H0B8 497 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 MYH7P12883 1935 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 A0A1W2PRG0 241 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 CNMDO75829 334 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 TFRCP02786 760 aaKnown RBP28.4■■■□□ 2.14
TPI1-210ENST00000613953 CYP2B6P20813 491 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 C12orf60Q5U649 245 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 LBX2Q6XYB7 198 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 GPR142Q7Z601 462 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 AMOTL1Q8IY63 956 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 DDRGK1Q96HY6 314 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 HTATIP2Q9BUP3 242 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 PUS7LQ9H0K6 701 aaKnown RBP28.4■■■□□ 2.14
TPI1-210ENST00000613953 RPAP3Q9H6T3 665 aaPredicted RBP28.4■■■□□ 2.14
TPI1-210ENST00000613953 SLC4A4Q9Y6R1 1079 aa28.4■■■□□ 2.14
TPI1-210ENST00000613953 RANBP2P49792 3224 aaKnown RBP28.4■■■□□ 2.14
TPI1-210ENST00000613953 H0YGN5 161 aa28.39■■■□□ 2.13
TPI1-210ENST00000613953 HABP4Q5JVS0 413 aaKnown RBP28.39■■■□□ 2.13
TPI1-210ENST00000613953 RPTORQ8N122 1335 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 CYP2D7A0A087X1C5 515 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 USP17L12C9JPN9 530 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 USP17L21D6R901 530 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 CCNA1P78396 465 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 TRIM32Q13049 653 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 PLEKHH3Q7Z736 793 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 USP6NLQ92738 828 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 DPF3Q92784 378 aa28.38■■■□□ 2.13
TPI1-210ENST00000613953 MORN1Q5T089 497 aa28.37■■■□□ 2.13
TPI1-210ENST00000613953 TSHZ3Q63HK5 1081 aa28.37■■■□□ 2.13
TPI1-210ENST00000613953 KBTBD3Q8NAB2 608 aa28.37■■■□□ 2.13
TPI1-210ENST00000613953 HMX1Q9NP08 348 aaPredicted RBP28.37■■■□□ 2.13
TPI1-210ENST00000613953 SPDYE16A6NNV3 312 aaPredicted RBP28.36■■■□□ 2.13
TPI1-210ENST00000613953 SMIM22K7EJ46 135 aa28.36■■■□□ 2.13
TPI1-210ENST00000613953 AKR1B1P15121 316 aa28.36■■■□□ 2.13
TPI1-210ENST00000613953 C16orf86Q6ZW13 317 aa28.36■■■□□ 2.13
TPI1-210ENST00000613953 TRMT44Q8IYL2 757 aaKnown RBP28.36■■■□□ 2.13
TPI1-210ENST00000613953 PCDHB15Q9Y5E8 787 aa28.36■■■□□ 2.13
TPI1-210ENST00000613953 BAZ2AQ9UIF9 1905 aaKnown RBP28.36■■■□□ 2.13
TPI1-210ENST00000613953 RGS2P41220 211 aa28.35■■■□□ 2.13
TPI1-210ENST00000613953 CDK8P49336 464 aa28.35■■■□□ 2.13
TPI1-210ENST00000613953 MAP3K21Q5TCX8 1036 aa28.35■■■□□ 2.13
TPI1-210ENST00000613953 CCDC17Q96LX7 622 aa28.35■■■□□ 2.13
TPI1-210ENST00000613953 CWC22Q9HCG8 908 aaKnown RBP28.35■■■□□ 2.13
TPI1-210ENST00000613953 ZKSCAN1P17029 563 aaPredicted RBP28.34■■■□□ 2.13
TPI1-210ENST00000613953 ICA1Q05084 483 aa28.34■■■□□ 2.13
TPI1-210ENST00000613953 CTR9Q6PD62 1173 aa28.34■■■□□ 2.13
TPI1-210ENST00000613953 APBA2Q99767 749 aa28.34■■■□□ 2.13
TPI1-210ENST00000613953 BTBD7Q9P203 1132 aa28.34■■■□□ 2.13
TPI1-210ENST00000613953 PRKAR2AP13861 404 aaKnown RBP28.34■■■□□ 2.13
TPI1-210ENST00000613953 RRP1P56182 461 aaKnown RBP28.34■■■□□ 2.13
TPI1-210ENST00000613953 CLEC10AQ8IUN9 316 aa28.34■■■□□ 2.13
TPI1-210ENST00000613953 SIAH1Q8IUQ4 282 aa28.34■■■□□ 2.13
TPI1-210ENST00000613953 STRBPQ96SI9 672 aaKnown RBP28.34■■■□□ 2.13
TPI1-210ENST00000613953 SH2D4AQ9H788 454 aa28.34■■■□□ 2.13
TPI1-210ENST00000613953 ARHGEF10LQ9HCE6 1279 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms