RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ABCB5Q2M3G0 1257 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 CATIPQ7Z7H3 387 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
TMEM254-213ENST00000613758 SULF1Q8IWU6 871 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 ZNF654Q8IZM8 581 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 MYL10Q9BUA6 226 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 KAT14Q9H8E8 782 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 NCOA5Q9HCD5 579 aaKnown RBP16.1■□□□□ 0.17
TMEM254-213ENST00000613758 MTMR4Q9NYA4 1195 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 STX8Q9UNK0 236 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
TMEM254-213ENST00000613758 WDR90Q96KV7 1748 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 SCN4AP35499 1836 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 MICU3Q86XE3 530 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
TMEM254-213ENST00000613758 RXRAP19793 462 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 NOVP48745 357 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.17
TMEM254-213ENST00000613758 SHROOM1Q2M3G4 852 aaPredicted RBP16.09■□□□□ 0.17
TMEM254-213ENST00000613758 CHMP4CQ96CF2 233 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 RRAGCQ9HB90 399 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 CABP5Q9NP86 173 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 MYH8P13535 1937 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 GH2P01242 217 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 JAG1P78504 1218 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 DCAF15Q66K64 600 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 TMEM179Q6ZVK1 233 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 CCDC144CPQ8IYA2 1237 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
TMEM254-213ENST00000613758 GOLGA8AA7E2F4 631 aa16.08■□□□□ 0.16
TMEM254-213ENST00000613758 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
TMEM254-213ENST00000613758 RCAN1P53805 252 aa16.08■□□□□ 0.16
TMEM254-213ENST00000613758 SEPT2Q15019 361 aa16.08■□□□□ 0.16
TMEM254-213ENST00000613758 SUPT20HL1Q3ZLR7 823 aa16.08■□□□□ 0.16
TMEM254-213ENST00000613758 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
TMEM254-213ENST00000613758 TNPO1Q92973 898 aaKnown RBP16.08■□□□□ 0.16
TMEM254-213ENST00000613758 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
TMEM254-213ENST00000613758 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
TMEM254-213ENST00000613758 PHF20L1A8MW92 1017 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
TMEM254-213ENST00000613758 DTNBO60941 627 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 TTLL1O95922 423 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 CALM1P0DP23 149 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 CALM2P0DP24 149 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 CALM3P0DP25 149 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 TOP1P11387 765 aaKnown RBP16.07■□□□□ 0.16
TMEM254-213ENST00000613758 GUCY1A2P33402 732 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 CAP2P40123 477 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 TROAPQ12815 778 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 CLEC10AQ8IUN9 316 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 FANCBQ8NB91 859 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 SMC3Q9UQE7 1217 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 POLR2AP24928 1970 aaKnown RBP16.07■□□□□ 0.16
TMEM254-213ENST00000613758 DDAH1O94760 285 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
TMEM254-213ENST00000613758 PKP1Q13835 747 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 DLK2Q6UY11 383 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 LLPHQ9BRT6 129 aaKnown RBP16.07■□□□□ 0.16
TMEM254-213ENST00000613758 ZNF341Q9BYN7 854 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 FAM217BQ9NTX9 383 aaPredicted RBP16.07■□□□□ 0.16
TMEM254-213ENST00000613758 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
TMEM254-213ENST00000613758 CDC27P30260 824 aa16.06■□□□□ 0.16
TMEM254-213ENST00000613758 ATP2B2Q01814 1243 aa16.06■□□□□ 0.16
TMEM254-213ENST00000613758 RTN1Q16799 776 aa16.06■□□□□ 0.16
TMEM254-213ENST00000613758 CPLX1O14810 134 aa16.06■□□□□ 0.16
TMEM254-213ENST00000613758 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
TMEM254-213ENST00000613758 NYAP2Q9P242 653 aa16.06■□□□□ 0.16
TMEM254-213ENST00000613758 ZBTB21Q9ULJ3 1066 aa16.06■□□□□ 0.16
TMEM254-213ENST00000613758 ZDHHC9Q9Y397 364 aa16.06■□□□□ 0.16
TMEM254-213ENST00000613758 NID2Q14112 1375 aa16.05■□□□□ 0.16
TMEM254-213ENST00000613758 CCDC196A0A1B0GTZ2 297 aa16.05■□□□□ 0.16
TMEM254-213ENST00000613758 EEF2P13639 858 aaKnown RBP16.05■□□□□ 0.16
TMEM254-213ENST00000613758 NUCB2P80303 420 aa16.05■□□□□ 0.16
TMEM254-213ENST00000613758 ICA1Q05084 483 aa16.05■□□□□ 0.16
TMEM254-213ENST00000613758 PPP2R5BQ15173 497 aa16.05■□□□□ 0.16
TMEM254-213ENST00000613758 SIAH1Q8IUQ4 282 aa16.05■□□□□ 0.16
TMEM254-213ENST00000613758 NSUN7Q8NE18 718 aaKnown RBP16.05■□□□□ 0.16
TMEM254-213ENST00000613758 GREB1LQ9C091 1923 aaPredicted RBP16.05■□□□□ 0.16
TMEM254-213ENST00000613758 JAK2O60674 1132 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
TMEM254-213ENST00000613758 POTEIP0CG38 1075 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 POTEJP0CG39 1038 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 GJB2P29033 226 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
TMEM254-213ENST00000613758 CDC37L1Q7L3B6 337 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 MKL1Q969V6 931 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 MAP3K14Q99558 947 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 MTMR7Q9Y216 660 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 MCM4P33991 863 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 LRRC47Q8N1G4 583 aaKnown RBP16.04■□□□□ 0.16
TMEM254-213ENST00000613758 CTCFLQ8NI51 663 aaPredicted RBP16.04■□□□□ 0.16
TMEM254-213ENST00000613758 SMARCC2Q8TAQ2 1214 aa16.04■□□□□ 0.16
TMEM254-213ENST00000613758 ZNF526Q8TF50 670 aaPredicted RBP16.04■□□□□ 0.16
TMEM254-213ENST00000613758 GLIS2Q9BZE0 524 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms