RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 ATP1A3P13637 1013 aa13.71□□□□□ -0.22
TUBD1-216ENST00000613721 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.22
TUBD1-216ENST00000613721 PTPN14Q15678 1187 aa13.71□□□□□ -0.22
TUBD1-216ENST00000613721 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.22
TUBD1-216ENST00000613721 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.22
TUBD1-216ENST00000613721 CCDC112Q8NEF3 446 aa13.71□□□□□ -0.22
TUBD1-216ENST00000613721 OXER1Q8TDS5 423 aa13.71□□□□□ -0.22
TUBD1-216ENST00000613721 ZNF384Q8TF68 577 aa13.71□□□□□ -0.22
TUBD1-216ENST00000613721 CBFA2T2O43439 604 aa13.7□□□□□ -0.22
TUBD1-216ENST00000613721 NRDCO43847 1150 aa13.7□□□□□ -0.22
TUBD1-216ENST00000613721 GRIN1Q05586 938 aa13.7□□□□□ -0.22
TUBD1-216ENST00000613721 FBXO33Q7Z6M2 555 aa13.7□□□□□ -0.22
TUBD1-216ENST00000613721 CCAR2Q8N163 923 aaKnown RBP13.7□□□□□ -0.22
TUBD1-216ENST00000613721 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
TUBD1-216ENST00000613721 NSUN4Q96CB9 384 aaKnown RBP13.7□□□□□ -0.22
TUBD1-216ENST00000613721 RBM28Q9NW13 759 aaKnown RBP13.7□□□□□ -0.22
TUBD1-216ENST00000613721 PDS5AQ29RF7 1337 aaKnown RBP13.7□□□□□ -0.22
TUBD1-216ENST00000613721 MYO1BO43795 1136 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 PRDM1O75626 825 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 FGRP09769 529 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 CALM1P0DP23 149 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 CALM2P0DP24 149 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 CALM3P0DP25 149 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 EVX2Q03828 476 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 POSTNQ15063 836 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 ARMCX5Q6P1M9 558 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 CTR9Q6PD62 1173 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 FOXP4Q8IVH2 680 aaPredicted RBP13.69□□□□□ -0.22
TUBD1-216ENST00000613721 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 CABP5Q9NP86 173 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 PODXL2Q9NZ53 605 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 SRPRBQ9Y5M8 271 aaKnown RBP13.69□□□□□ -0.22
TUBD1-216ENST00000613721 FOXN1O15353 648 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 POLR2DO15514 142 aaKnown RBP13.69□□□□□ -0.22
TUBD1-216ENST00000613721 PRPF3O43395 683 aaKnown RBP13.69□□□□□ -0.22
TUBD1-216ENST00000613721 SERPINC1P01008 464 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 SERPINB2P05120 415 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 ATP2B1P20020 1258 aa13.69□□□□□ -0.22
TUBD1-216ENST00000613721 MDM2Q00987 491 aaPredicted RBP13.69□□□□□ -0.22
TUBD1-216ENST00000613721 NOL10Q9BSC4 688 aaKnown RBP13.69□□□□□ -0.22
TUBD1-216ENST00000613721 TRMT1Q9NXH9 659 aaKnown RBP13.69□□□□□ -0.22
TUBD1-216ENST00000613721 KIAA1551Q9HCM1 1747 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 USP17L21D6R901 530 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 DDAH1O94760 285 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 APBA3O96018 575 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 KRT2P35908 639 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 UBASH3AP57075 661 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 MECOMQ03112 1051 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 FUT2Q10981 343 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 PKN1Q16512 942 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 SHISA4Q96DD7 197 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 CRNKL1Q9BZJ0 848 aaKnown RBP13.68□□□□□ -0.22
TUBD1-216ENST00000613721 SERTAD1Q9UHV2 236 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 HIBADHP31937 336 aaKnown RBP13.68□□□□□ -0.22
TUBD1-216ENST00000613721 KCNJ6P48051 423 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 TROAPQ12815 778 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 CFAP100Q494V2 611 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 ANKRD7Q92527 254 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 ARID3AQ99856 593 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 ANKRD2Q9GZV1 360 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 MAN1B1Q9UKM7 699 aa13.68□□□□□ -0.22
TUBD1-216ENST00000613721 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
TUBD1-216ENST00000613721 MORC2Q9Y6X9 1032 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-216ENST00000613721 TRIM75PA6NK02 468 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-216ENST00000613721 BMP6P22004 513 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 SYCP1Q15431 976 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 NT5DC1Q5TFE4 455 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 SMARCE1Q969G3 411 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 CSRNP2Q9H175 543 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 AATFQ9NY61 560 aaKnown RBP eCLIP13.67□□□□□ -0.22
TUBD1-216ENST00000613721 ANKIB1Q9P2G1 1089 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 DACH1Q9UI36 760 aa13.67□□□□□ -0.22
TUBD1-216ENST00000613721 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-216ENST00000613721 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 FAM205CA6NFA0 338 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 ORC4O43929 436 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 PDE4BQ07343 736 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 TMTC3Q6ZXV5 915 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 PDILTQ8N807 584 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 TRIML1Q8N9V2 468 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 DPF2Q92785 391 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 CCDC94Q9BW85 323 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 DCP1AQ9NPI6 582 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 FANCLQ9NW38 375 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 ARPP21Q9UBL0 812 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 ACTN4O43707 911 aaKnown RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 PRDX5P30044 214 aa13.66□□□□□ -0.22
TUBD1-216ENST00000613721 NCBP1Q09161 790 aaKnown RBP13.66□□□□□ -0.22
TUBD1-216ENST00000613721 GRIK5Q16478 980 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms