RNA–Protein interactions for RNA: ENST00000612728.4

ZNHIT3-202, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 1 (best)

Gene ZNHIT3, Length 1,981 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-202ENST00000612728 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 PNMA1Q8ND90 353 aa15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 EHD4Q9H223 541 aa15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 RBM27Q9P2N5 1060 aaKnown RBP15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 SERPINB13Q9UIV8 391 aa15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 PRPF3O43395 683 aaKnown RBP15.33■□□□□ 0.04
ZNHIT3-202ENST00000612728 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.04
ZNHIT3-202ENST00000612728 NIM1KQ8IY84 436 aa15.33■□□□□ 0.04
ZNHIT3-202ENST00000612728 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.04
ZNHIT3-202ENST00000612728 GOLGA6L4A6NEF3 574 aa15.32■□□□□ 0.04
ZNHIT3-202ENST00000612728 VIL1P09327 827 aaKnown RBP15.32■□□□□ 0.04
ZNHIT3-202ENST00000612728 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
ZNHIT3-202ENST00000612728 NFIAQ12857 509 aa15.32■□□□□ 0.04
ZNHIT3-202ENST00000612728 CCDC82Q8N4S0 544 aa15.32■□□□□ 0.04
ZNHIT3-202ENST00000612728 USP28Q96RU2 1077 aa15.32■□□□□ 0.04
ZNHIT3-202ENST00000612728 RCOR1Q9UKL0 485 aa15.32■□□□□ 0.04
ZNHIT3-202ENST00000612728 ZNRF3Q9ULT6 936 aa15.32■□□□□ 0.04
ZNHIT3-202ENST00000612728 KIF28PB7ZC32 967 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 PLEKHA8P1O95397 391 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 XBP1P17861 261 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 U2AF2P26368 475 aaKnown RBP eCLIP15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 NOVP48745 357 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 SAFBQ15424 915 aaKnown RBP eCLIP15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 MYSM1Q5VVJ2 828 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 TAOK3Q9H2K8 898 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 STX8Q9UNK0 236 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 SIPA1L1O43166 1804 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 COL2A1P02458 1487 aaPredicted RBP15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 CNTNAP5Q8WYK1 1306 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 UBE2Q2LH0YL09 131 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 MMP1P03956 469 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 GNL2Q13823 731 aaKnown RBP15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 GRM4Q14833 912 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 CFAP100Q494V2 611 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 GMLQ99445 158 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 TMEM47Q9BQJ4 181 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 RTEL1Q9NZ71 1219 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 HDAC9Q9UKV0 1011 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 PCDHAC2Q9Y5I4 1007 aa15.31■□□□□ 0.04
ZNHIT3-202ENST00000612728 PSMD14O00487 310 aa15.3■□□□□ 0.04
ZNHIT3-202ENST00000612728 RAD17O75943 681 aa15.3■□□□□ 0.04
ZNHIT3-202ENST00000612728 GNAQP50148 359 aa15.3■□□□□ 0.04
ZNHIT3-202ENST00000612728 CCDC183Q5T5S1 534 aa15.3■□□□□ 0.04
ZNHIT3-202ENST00000612728 PPP1R1BQ9UD71 204 aaPredicted RBP15.3■□□□□ 0.04
ZNHIT3-202ENST00000612728 FAM198AQ9UFP1 575 aa15.3■□□□□ 0.04
ZNHIT3-202ENST00000612728 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 TOP1P11387 765 aaKnown RBP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 PKN1Q16512 942 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 KLHL34Q8N239 644 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 SRBD1Q8N5C6 995 aaKnown RBP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 AGBL3Q8NEM8 1001 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 V9GY48 417 aaPredicted RBP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 ENTPD3O75355 529 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 YEATS4O95619 227 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 SHMT1P34896 483 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 NASPP49321 788 aaPredicted RBP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 CACNB3P54284 484 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 OGFOD1Q8N543 542 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 CEP95Q96GE4 821 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 FTOQ9C0B1 505 aaKnown RBP eCLIP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 FOXP1Q9H334 677 aaPredicted RBP15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 PI4KBQ9UBF8 816 aa15.29■□□□□ 0.04
ZNHIT3-202ENST00000612728 ATRNL1Q5VV63 1379 aa15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 IGKV6D-41A0A0C4DH26 115 aa15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 LETM1O95202 739 aaPredicted RBP15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 PTGER2P43116 358 aa15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 MRE11P49959 708 aa15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 ZFPM1Q8IX07 1006 aa15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 DIS3L2Q8IYB7 885 aaKnown RBP15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 PGBD1Q96JS3 809 aa15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 PRMT6Q96LA8 375 aaPredicted RBP15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 LZTS2Q9BRK4 669 aa15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 TDRD3Q9H7E2 651 aaKnown RBP15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
ZNHIT3-202ENST00000612728 SYCE3A1L190 88 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 AKR1B1P15121 316 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 TCP10Q12799 353 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 TPRNQ4KMQ1 711 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 PPP4R3BQ5MIZ7 849 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 LRSAM1Q6UWE0 723 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 GAS2L3Q86XJ1 694 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 NOSTRINQ8IVI9 506 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 KCNG4Q8TDN1 519 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 JDP2Q8WYK2 163 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 CCDC17Q96LX7 622 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 MTMR4Q9NYA4 1195 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 TMOD2Q9NZR1 351 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 MAD2L2Q9UI95 211 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 KCNJ14Q9UNX9 436 aa15.27■□□□□ 0.04
ZNHIT3-202ENST00000612728 LTBP3Q9NS15 1303 aa15.27■□□□□ 0.03
ZNHIT3-202ENST00000612728 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms