RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 SMAD3P84022 425 aaKnown RBP16.91■□□□□ 0.3
LINC00116-203ENST00000611969 TRIM60Q495X7 471 aa16.91■□□□□ 0.3
LINC00116-203ENST00000611969 ANO1Q5XXA6 986 aa16.91■□□□□ 0.3
LINC00116-203ENST00000611969 SH3RF1Q7Z6J0 888 aa16.91■□□□□ 0.3
LINC00116-203ENST00000611969 METTL16Q86W50 562 aaKnown RBP16.91■□□□□ 0.3
LINC00116-203ENST00000611969 CRACR2BQ8N4Y2 399 aaPredicted RBP16.91■□□□□ 0.3
LINC00116-203ENST00000611969 TGFBRAP1Q8WUH2 860 aa16.91■□□□□ 0.3
LINC00116-203ENST00000611969 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
LINC00116-203ENST00000611969 PDLIM7Q9NR12 457 aa16.91■□□□□ 0.3
LINC00116-203ENST00000611969 RAPGEFL1Q9UHV5 662 aa16.91■□□□□ 0.3
LINC00116-203ENST00000611969 PALD1Q9ULE6 856 aa16.91■□□□□ 0.3
LINC00116-203ENST00000611969 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
LINC00116-203ENST00000611969 SLC15A5A6NIM6 579 aa16.9■□□□□ 0.3
LINC00116-203ENST00000611969 MSCO60682 206 aa16.9■□□□□ 0.3
LINC00116-203ENST00000611969 IGHA2P01877 340 aa16.9■□□□□ 0.3
LINC00116-203ENST00000611969 COL9A1P20849 921 aa16.9■□□□□ 0.3
LINC00116-203ENST00000611969 GRB14Q14449 540 aa16.9■□□□□ 0.3
LINC00116-203ENST00000611969 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
LINC00116-203ENST00000611969 USP17L2Q6R6M4 530 aa16.9■□□□□ 0.3
LINC00116-203ENST00000611969 NEUROD6Q96NK8 337 aa16.9■□□□□ 0.3
LINC00116-203ENST00000611969 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
LINC00116-203ENST00000611969 SAP30BPQ9UHR5 308 aaKnown RBP16.9■□□□□ 0.3
LINC00116-203ENST00000611969 PARP14Q460N5 1801 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 TRIM43BA6NCK2 446 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 GH2P01242 217 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 HOXC6P09630 235 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 ATP2B2Q01814 1243 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 SNX17Q15036 470 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 SLC39A5Q6ZMH5 540 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 TRIM43Q96BQ3 446 aaPredicted RBP16.89■□□□□ 0.29
LINC00116-203ENST00000611969 C12orf42Q96LP6 360 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 LRP2BPQ9P2M1 347 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
LINC00116-203ENST00000611969 NAV1Q8NEY1 1877 aa16.88■□□□□ 0.29
LINC00116-203ENST00000611969 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
LINC00116-203ENST00000611969 CCNA1P78396 465 aa16.88■□□□□ 0.29
LINC00116-203ENST00000611969 FEZ1Q99689 392 aa16.88■□□□□ 0.29
LINC00116-203ENST00000611969 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
LINC00116-203ENST00000611969 TRIM34Q9BYJ4 488 aa16.88■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 SRGAP3O43295 1099 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 VCAM1P19320 739 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 ITGB8P26012 769 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 EPHB4P54760 987 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
LINC00116-203ENST00000611969 SYMPKQ92797 1274 aaKnown RBP16.87■□□□□ 0.29
LINC00116-203ENST00000611969 SNRKQ9NRH2 765 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 GINM1Q9NU53 330 aa16.87■□□□□ 0.29
LINC00116-203ENST00000611969 PLXNA1Q9UIW2 1896 aa16.86■□□□□ 0.29
LINC00116-203ENST00000611969 ZNFX1Q9P2E3 1918 aaKnown RBP16.86■□□□□ 0.29
LINC00116-203ENST00000611969 SMCHD1A6NHR9 2005 aa16.86■□□□□ 0.29
LINC00116-203ENST00000611969 SPDYE16A6NNV3 312 aaPredicted RBP16.86■□□□□ 0.29
LINC00116-203ENST00000611969 KBTBD13C9JR72 458 aa16.86■□□□□ 0.29
LINC00116-203ENST00000611969 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
LINC00116-203ENST00000611969 GNAI3P08754 354 aa16.86■□□□□ 0.29
LINC00116-203ENST00000611969 CATSPERGQ6ZRH7 1159 aa16.86■□□□□ 0.29
LINC00116-203ENST00000611969 FOXP4Q8IVH2 680 aaPredicted RBP16.86■□□□□ 0.29
LINC00116-203ENST00000611969 MIER1Q8N108 512 aa16.86■□□□□ 0.29
LINC00116-203ENST00000611969 IVNS1ABPQ9Y6Y0 642 aa16.86■□□□□ 0.29
LINC00116-203ENST00000611969 COL11A1P12107 1806 aaPredicted RBP16.86■□□□□ 0.29
LINC00116-203ENST00000611969 BAG3O95817 575 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 ADCYAP1R1P41586 468 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 PPP4CP60510 307 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 GRIN2CQ14957 1233 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 TJAP1Q5JTD0 557 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 LBX2Q6XYB7 198 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 ARRDC4Q8NCT1 418 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 ACER1Q8TDN7 264 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 FERMT2Q96AC1 680 aa16.85■□□□□ 0.29
LINC00116-203ENST00000611969 RNPC3Q96LT9 517 aaKnown RBP16.85■□□□□ 0.29
LINC00116-203ENST00000611969 TNFRSF10AO00220 468 aa16.84■□□□□ 0.29
LINC00116-203ENST00000611969 PLCG2P16885 1265 aa16.84■□□□□ 0.29
LINC00116-203ENST00000611969 ADORA2AP29274 412 aa16.84■□□□□ 0.29
LINC00116-203ENST00000611969 DYNLL1P63167 89 aaKnown RBP16.84■□□□□ 0.29
LINC00116-203ENST00000611969 CHD9Q3L8U1 2897 aa16.84■□□□□ 0.29
LINC00116-203ENST00000611969 GBF1Q92538 1859 aa16.84■□□□□ 0.29
LINC00116-203ENST00000611969 MYH8P13535 1937 aa16.84■□□□□ 0.29
LINC00116-203ENST00000611969 TMEM265A0A087WTH1 108 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 SEPT4O43236 478 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 HLA-DOAP06340 250 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 TLE2Q04725 743 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 MTX1Q13505 466 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 LRRC41Q15345 812 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 PRAMEF19Q5SWL8 479 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 OLFML2BQ68BL8 750 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 KIAA1683Q9H0B3 1180 aa16.83■□□□□ 0.28
LINC00116-203ENST00000611969 RPAP3Q9H6T3 665 aaPredicted RBP16.83■□□□□ 0.28
LINC00116-203ENST00000611969 REV3LO60673 3130 aa16.82■□□□□ 0.28
LINC00116-203ENST00000611969 UQCRFS1P1P0C7P4 283 aa16.82■□□□□ 0.28
LINC00116-203ENST00000611969 DNAJB2P25686 324 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms