RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 STAMQ92783 540 aa17.19■□□□□ 0.34
PCDHGB1-202ENST00000611598 ABCB6Q9NP58 842 aa17.19■□□□□ 0.34
PCDHGB1-202ENST00000611598 ANKRD18BA2A2Z9 1011 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 DEXIO95424 95 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 CTSWP56202 376 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 PAGE5Q96GU1 130 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 AK7Q96M32 723 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 NAA15Q9BXJ9 866 aaKnown RBP17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 RAB21Q9UL25 225 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 hCG_1642624A0A1W2PR95 340 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 CDC25AP30304 524 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 CEP112Q8N8E3 955 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 MSANTD4Q8NCY6 345 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 HNRNPLLQ8WVV9 542 aaKnown RBP17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 ZFP91Q96JP5 570 aaPredicted RBP17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 NID2Q14112 1375 aa17.18■□□□□ 0.34
PCDHGB1-202ENST00000611598 RNF225M0QZC1 329 aaPredicted RBP17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 USP5P45974 858 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 VSNL1P62760 191 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 ERVK-24P63145 666 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 TNS2Q63HR2 1409 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 SYMPKQ92797 1274 aaKnown RBP17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 CTAGE9A4FU28 777 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 PPP1R3GB7ZBB8 358 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 SLC20A2Q08357 652 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 TRIM34Q9BYJ4 488 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 KRT23Q9C075 422 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 CNNM2Q9H8M5 875 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 VPS54Q9P1Q0 977 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 L1RE1Q9UN81 338 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 CEP131Q9UPN4 1083 aa17.17■□□□□ 0.34
PCDHGB1-202ENST00000611598 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 TRIM66O15016 1216 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 RASGRF1Q13972 1273 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 NOM1Q5C9Z4 860 aaKnown RBP17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 HDXQ7Z353 690 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 SH3RF1Q7Z6J0 888 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 FANCBQ8NB91 859 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 AATFQ9NY61 560 aaKnown RBP eCLIP17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 PSD3Q9NYI0 1048 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 CHD4Q14839 1912 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 TDO2P48775 406 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 ZNF654Q8IZM8 581 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 GOLGA5Q8TBA6 731 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 CTNND2Q9UQB3 1225 aa17.16■□□□□ 0.34
PCDHGB1-202ENST00000611598 TRIM75PA6NK02 468 aa17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 IRS4O14654 1257 aaPredicted RBP17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 PRDM1O75626 825 aa17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 ATF3P18847 181 aa17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 NOA1Q8NC60 698 aaKnown RBP17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 FAN1Q9Y2M0 1017 aa17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 ASAP1Q9ULH1 1129 aa17.15■□□□□ 0.34
PCDHGB1-202ENST00000611598 UQCRFS1P1P0C7P4 283 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 ARHGAP25P42331 645 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 NKX1-1Q15270 411 aaPredicted RBP17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 CNGA4Q8IV77 575 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 ACTN2P35609 894 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 KRT31Q15323 416 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 FILIP1LQ4L180 1135 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 BLZF1Q9H2G9 400 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 MYH8P13535 1937 aa17.14■□□□□ 0.33
PCDHGB1-202ENST00000611598 WDR17Q8IZU2 1322 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 ERICH2A1L162 156 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 MYO1CO00159 1063 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 FECHP22830 423 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 MAP3K12Q12852 859 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 PUM3Q15397 648 aaKnown RBP17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 C10orf67Q8IYJ2 551 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 NAPGQ99747 312 aaPredicted RBP17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 VPS16Q9H269 839 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 ABHD10Q9NUJ1 306 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 STRCQ7RTU9 1775 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 POTEB2H3BUK9 544 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 PHACTR2O75167 634 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 FGFR2P21802 821 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 PKN1Q16512 942 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 TRIM10Q9UDY6 481 aa17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
PCDHGB1-202ENST00000611598 CCDC196A0A1B0GTZ2 297 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 CTAGE15A4D2H0 777 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 ERLIN1O75477 346 aa17.12■□□□□ 0.33
PCDHGB1-202ENST00000611598 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms