RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 RNF208Q9H0X6 261 aa8.9□□□□□ -0.98
CLK4-214ENST00000611575 TMOD2Q9NZR1 351 aa8.9□□□□□ -0.98
CLK4-214ENST00000611575 COG6Q9Y2V7 657 aa8.9□□□□□ -0.98
CLK4-214ENST00000611575 AFG3L2Q9Y4W6 797 aa8.9□□□□□ -0.98
CLK4-214ENST00000611575 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
CLK4-214ENST00000611575 PTPRAP18433 802 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 PRDX5P30044 214 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 FLT3LGP49771 235 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 FCGRTP55899 365 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 UBXN2AP68543 259 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 CHAF1AQ13111 956 aaPredicted RBP8.89□□□□□ -0.99
CLK4-214ENST00000611575 METTL24Q5JXM2 366 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 ZFPM1Q8IX07 1006 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 SCYL3Q8IZE3 742 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 WDR66Q8TBY9 1149 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 DPF3Q92784 378 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 USP44Q9H0E7 712 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 TSR3Q9UJK0 312 aaKnown RBP8.89□□□□□ -0.99
CLK4-214ENST00000611575 NR2E3Q9Y5X4 410 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 CDH23Q9H251 3354 aa8.89□□□□□ -0.99
CLK4-214ENST00000611575 PDS5AQ29RF7 1337 aaKnown RBP8.88□□□□□ -0.99
CLK4-214ENST00000611575 ENTPD3O75355 529 aa8.88□□□□□ -0.99
CLK4-214ENST00000611575 INHAP05111 366 aa8.88□□□□□ -0.99
CLK4-214ENST00000611575 VPS37DQ86XT2 251 aa8.88□□□□□ -0.99
CLK4-214ENST00000611575 KLHDC4Q8TBB5 520 aa8.88□□□□□ -0.99
CLK4-214ENST00000611575 LPIN2Q92539 896 aa8.88□□□□□ -0.99
CLK4-214ENST00000611575 COL2A1P02458 1487 aaPredicted RBP8.88□□□□□ -0.99
CLK4-214ENST00000611575 CUL9Q8IWT3 2517 aa8.87□□□□□ -0.99
CLK4-214ENST00000611575 EYA2O00167 538 aa8.87□□□□□ -0.99
CLK4-214ENST00000611575 DLL1O00548 723 aa8.87□□□□□ -0.99
CLK4-214ENST00000611575 ADCY3O60266 1144 aa8.87□□□□□ -0.99
CLK4-214ENST00000611575 IFIT1P09914 478 aaKnown RBP8.87□□□□□ -0.99
CLK4-214ENST00000611575 LRIT3Q3SXY7 679 aa8.87□□□□□ -0.99
CLK4-214ENST00000611575 FASTKD5Q7L8L6 764 aaKnown RBP8.87□□□□□ -0.99
CLK4-214ENST00000611575 ANKLE1Q8NAG6 615 aa8.87□□□□□ -0.99
CLK4-214ENST00000611575 GJD2Q9UKL4 321 aa8.87□□□□□ -0.99
CLK4-214ENST00000611575 DNAH12Q6ZR08 3092 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 PTPRCP08575 1304 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 RAD21O60216 631 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 CTNND1O60716 968 aaKnown RBP8.86□□□□□ -0.99
CLK4-214ENST00000611575 AP1G2O75843 785 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 CIAO1O76071 339 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 ELNP15502 786 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 TCP10Q12799 353 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 MTMR2Q13614 643 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 FAM110CQ1W6H9 321 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 MAP3K21Q5TCX8 1036 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 SLC4A10Q6U841 1118 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 ZNF384Q8TF68 577 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 DDX4Q9NQI0 724 aaKnown RBP8.86□□□□□ -0.99
CLK4-214ENST00000611575 AGTPBP1Q9UPW5 1226 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 ZHX2Q9Y6X8 837 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 PRUNE2Q8WUY3 3088 aa8.86□□□□□ -0.99
CLK4-214ENST00000611575 PHIPQ8WWQ0 1821 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 DDTLA6NHG4 134 aaPredicted RBP8.85□□□□□ -0.99
CLK4-214ENST00000611575 APBB1O00213 710 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 FRAT2O75474 233 aaPredicted RBP8.85□□□□□ -0.99
CLK4-214ENST00000611575 SLURP2P0DP57 97 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 RGS3P49796 1198 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 RHBDL3P58872 404 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 HOMEZQ8IX15 550 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 SLC17A8Q8NDX2 589 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 DIS3LQ8TF46 1054 aaKnown RBP8.85□□□□□ -0.99
CLK4-214ENST00000611575 DEFB118Q96PH6 123 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 USP40Q9NVE5 1235 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 STAP2Q9UGK3 403 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 OGDHLQ9ULD0 1010 aa8.85□□□□□ -0.99
CLK4-214ENST00000611575 LOC285556D6RIA3 1793 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 TNPO2O14787 897 aaKnown RBP8.84□□□□□ -0.99
CLK4-214ENST00000611575 ACTN4O43707 911 aaKnown RBP8.84□□□□□ -0.99
CLK4-214ENST00000611575 RNF40O75150 1001 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 RGS20O76081 388 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 LDHBP07195 334 aaKnown RBP8.84□□□□□ -0.99
CLK4-214ENST00000611575 COL6A1P12109 1028 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 SLC5A1P13866 664 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 KCNC4Q03721 635 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 KMT5BQ4FZB7 885 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 MORN1Q5T089 497 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 TREML2Q5T2D2 321 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 PAWRQ96IZ0 340 aaKnown RBP8.84□□□□□ -0.99
CLK4-214ENST00000611575 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLK4-214ENST00000611575 MORF4L1Q9UBU8 362 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 STXBP5LQ9Y2K9 1186 aa8.84□□□□□ -0.99
CLK4-214ENST00000611575 PTPRFP10586 1907 aa8.84□□□□□ -1
CLK4-214ENST00000611575 ALPK3Q96L96 1907 aa8.84□□□□□ -1
CLK4-214ENST00000611575 PFASO15067 1338 aa8.83□□□□□ -1
CLK4-214ENST00000611575 MGAMO43451 1857 aa8.83□□□□□ -1
CLK4-214ENST00000611575 DOCK2Q92608 1830 aa8.83□□□□□ -1
CLK4-214ENST00000611575 GPR75-ASB3A0A0A6YYF3 556 aa8.83□□□□□ -1
CLK4-214ENST00000611575 HMGCRP04035 888 aa8.83□□□□□ -1
CLK4-214ENST00000611575 PHKA1P46020 1223 aa8.83□□□□□ -1
CLK4-214ENST00000611575 PPP4CP60510 307 aa8.83□□□□□ -1
CLK4-214ENST00000611575 RASGRF1Q13972 1273 aa8.83□□□□□ -1
CLK4-214ENST00000611575 NECAB2Q7Z6G3 386 aa8.83□□□□□ -1
CLK4-214ENST00000611575 METTL16Q86W50 562 aaKnown RBP8.83□□□□□ -1
CLK4-214ENST00000611575 ANKRD13CQ8N6S4 541 aa8.83□□□□□ -1
CLK4-214ENST00000611575 USP6NLQ92738 828 aa8.83□□□□□ -1
CLK4-214ENST00000611575 PICK1Q9NRD5 415 aa8.83□□□□□ -1
CLK4-214ENST00000611575 MTMR10Q9NXD2 777 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms