RNA–Protein interactions for RNA: ENST00000610893.4

LTBP4-232, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-232ENST00000610893 MAPK4P31152 587 aa23.97■■□□□ 1.43
LTBP4-232ENST00000610893 UBE2Q1Q7Z7E8 422 aa23.97■■□□□ 1.43
LTBP4-232ENST00000610893 SWAP70Q9UH65 585 aa23.97■■□□□ 1.43
LTBP4-232ENST00000610893 HMGCRP04035 888 aa23.96■■□□□ 1.43
LTBP4-232ENST00000610893 ERVK-9P63128 1117 aa23.96■■□□□ 1.43
LTBP4-232ENST00000610893 ERVK-24P63145 666 aa23.96■■□□□ 1.43
LTBP4-232ENST00000610893 CCAR1Q8IX12 1150 aaKnown RBP23.96■■□□□ 1.43
LTBP4-232ENST00000610893 ACER1Q8TDN7 264 aa23.96■■□□□ 1.43
LTBP4-232ENST00000610893 PAK6Q9NQU5 681 aaPredicted RBP23.96■■□□□ 1.43
LTBP4-232ENST00000610893 ECHDC1Q9NTX5 307 aa23.96■■□□□ 1.43
LTBP4-232ENST00000610893 RABGAP1Q9Y3P9 1069 aa23.96■■□□□ 1.43
LTBP4-232ENST00000610893 SMARCA5O60264 1052 aaPredicted RBP23.95■■□□□ 1.42
LTBP4-232ENST00000610893 MBD4O95243 580 aa23.95■■□□□ 1.42
LTBP4-232ENST00000610893 GUCY1A2P33402 732 aa23.95■■□□□ 1.42
LTBP4-232ENST00000610893 ZYXQ15942 572 aaKnown RBP23.95■■□□□ 1.42
LTBP4-232ENST00000610893 Q3C1V9 767 aa23.95■■□□□ 1.42
LTBP4-232ENST00000610893 CATSPERGQ6ZRH7 1159 aa23.95■■□□□ 1.42
LTBP4-232ENST00000610893 SOCS4Q8WXH5 440 aa23.95■■□□□ 1.42
LTBP4-232ENST00000610893 DEFB118Q96PH6 123 aa23.95■■□□□ 1.42
LTBP4-232ENST00000610893 NUDT12Q9BQG2 462 aa23.95■■□□□ 1.42
LTBP4-232ENST00000610893 HTATIP2Q9BUP3 242 aa23.95■■□□□ 1.42
LTBP4-232ENST00000610893 TFRCP02786 760 aaKnown RBP23.94■■□□□ 1.42
LTBP4-232ENST00000610893 XRCC5P13010 732 aaKnown RBP23.94■■□□□ 1.42
LTBP4-232ENST00000610893 VCAM1P19320 739 aa23.94■■□□□ 1.42
LTBP4-232ENST00000610893 SEPT2Q15019 361 aa23.94■■□□□ 1.42
LTBP4-232ENST00000610893 AMOTL1Q8IY63 956 aa23.94■■□□□ 1.42
LTBP4-232ENST00000610893 DDRGK1Q96HY6 314 aa23.94■■□□□ 1.42
LTBP4-232ENST00000610893 CEP290O15078 2479 aa23.94■■□□□ 1.42
LTBP4-232ENST00000610893 DOCK3Q8IZD9 2030 aa23.94■■□□□ 1.42
LTBP4-232ENST00000610893 MPHOSPH10O00566 681 aaKnown RBP23.93■■□□□ 1.42
LTBP4-232ENST00000610893 PRKAB2O43741 272 aa23.93■■□□□ 1.42
LTBP4-232ENST00000610893 CCNA1P78396 465 aa23.93■■□□□ 1.42
LTBP4-232ENST00000610893 LBX2Q6XYB7 198 aa23.93■■□□□ 1.42
LTBP4-232ENST00000610893 TRMT44Q8IYL2 757 aaKnown RBP23.93■■□□□ 1.42
LTBP4-232ENST00000610893 DPF3Q92784 378 aa23.93■■□□□ 1.42
LTBP4-232ENST00000610893 GPATCH3Q96I76 525 aa23.93■■□□□ 1.42
LTBP4-232ENST00000610893 PAGR1Q9BTK6 254 aa23.93■■□□□ 1.42
LTBP4-232ENST00000610893 RPTORQ8N122 1335 aa23.92■■□□□ 1.42
LTBP4-232ENST00000610893 PEX10O60683 326 aa23.92■■□□□ 1.42
LTBP4-232ENST00000610893 FARP2O94887 1054 aaPredicted RBP23.92■■□□□ 1.42
LTBP4-232ENST00000610893 CYP2D6P10635 497 aa23.92■■□□□ 1.42
LTBP4-232ENST00000610893 SLFNL1Q499Z3 407 aa23.92■■□□□ 1.42
LTBP4-232ENST00000610893 POTEEQ6S8J3 1075 aa23.92■■□□□ 1.42
LTBP4-232ENST00000610893 TMEM179Q6ZVK1 233 aa23.92■■□□□ 1.42
LTBP4-232ENST00000610893 CCDC17Q96LX7 622 aa23.92■■□□□ 1.42
LTBP4-232ENST00000610893 CRISPLD2Q9H0B8 497 aa23.92■■□□□ 1.42
LTBP4-232ENST00000610893 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.92■■□□□ 1.424e-7■□□□□ 8.5
LTBP4-232ENST00000610893 HMX1Q9NP08 348 aaPredicted RBP23.92■■□□□ 1.42
LTBP4-232ENST00000610893 CYP2B6P20813 491 aa23.91■■□□□ 1.42
LTBP4-232ENST00000610893 EVX2Q03828 476 aa23.91■■□□□ 1.42
LTBP4-232ENST00000610893 HABP4Q5JVS0 413 aaKnown RBP23.91■■□□□ 1.42
LTBP4-232ENST00000610893 C12orf60Q5U649 245 aa23.91■■□□□ 1.42
LTBP4-232ENST00000610893 GPR142Q7Z601 462 aa23.91■■□□□ 1.42
LTBP4-232ENST00000610893 PLEKHH3Q7Z736 793 aa23.91■■□□□ 1.42
LTBP4-232ENST00000610893 PORCNQ9H237 461 aa23.91■■□□□ 1.42
LTBP4-232ENST00000610893 USP17L12C9JPN9 530 aa23.9■■□□□ 1.42
LTBP4-232ENST00000610893 USP17L21D6R901 530 aa23.9■■□□□ 1.42
LTBP4-232ENST00000610893 GLRX3O76003 335 aaKnown RBP23.9■■□□□ 1.42
LTBP4-232ENST00000610893 USP6NLQ92738 828 aa23.9■■□□□ 1.42
LTBP4-232ENST00000610893 DYNLL2Q96FJ2 89 aa23.9■■□□□ 1.42
LTBP4-232ENST00000610893 RPAP3Q9H6T3 665 aaPredicted RBP23.9■■□□□ 1.42
LTBP4-232ENST00000610893 SLC4A4Q9Y6R1 1079 aa23.9■■□□□ 1.42
LTBP4-232ENST00000610893 A0A1W2PRG0 241 aa23.89■■□□□ 1.41
LTBP4-232ENST00000610893 H0YGN5 161 aa23.89■■□□□ 1.41
LTBP4-232ENST00000610893 RGS2P41220 211 aa23.89■■□□□ 1.41
LTBP4-232ENST00000610893 MORN1Q5T089 497 aa23.89■■□□□ 1.41
LTBP4-232ENST00000610893 KBTBD3Q8NAB2 608 aa23.89■■□□□ 1.41
LTBP4-232ENST00000610893 SLC44A5Q8NCS7 719 aa23.89■■□□□ 1.41
LTBP4-232ENST00000610893 TRIB2Q92519 343 aa23.89■■□□□ 1.41
LTBP4-232ENST00000610893 PUS7LQ9H0K6 701 aaKnown RBP23.89■■□□□ 1.41
LTBP4-232ENST00000610893 CWC22Q9HCG8 908 aaKnown RBP23.89■■□□□ 1.41
LTBP4-232ENST00000610893 HOXC10Q9NYD6 342 aa23.89■■□□□ 1.41
LTBP4-232ENST00000610893 DDX60LQ5H9U9 1706 aaKnown RBP23.89■■□□□ 1.41
LTBP4-232ENST00000610893 CNMDO75829 334 aa23.88■■□□□ 1.41
LTBP4-232ENST00000610893 CHGBP05060 677 aa23.88■■□□□ 1.41
LTBP4-232ENST00000610893 CDK8P49336 464 aa23.88■■□□□ 1.41
LTBP4-232ENST00000610893 COG2Q14746 738 aa23.88■■□□□ 1.41
LTBP4-232ENST00000610893 ANKLE1Q8NAG6 615 aa23.88■■□□□ 1.41
LTBP4-232ENST00000610893 NR2E3Q9Y5X4 410 aa23.88■■□□□ 1.41
LTBP4-232ENST00000610893 MAP3K21Q5TCX8 1036 aa23.87■■□□□ 1.41
LTBP4-232ENST00000610893 C16orf86Q6ZW13 317 aa23.87■■□□□ 1.41
LTBP4-232ENST00000610893 LPAR1Q92633 364 aa23.87■■□□□ 1.41
LTBP4-232ENST00000610893 SH2D4AQ9H788 454 aa23.87■■□□□ 1.41
LTBP4-232ENST00000610893 ARHGEF10LQ9HCE6 1279 aa23.87■■□□□ 1.41
LTBP4-232ENST00000610893 SPDYE16A6NNV3 312 aaPredicted RBP23.86■■□□□ 1.41
LTBP4-232ENST00000610893 ZFYP08048 801 aaPredicted RBP23.86■■□□□ 1.41
LTBP4-232ENST00000610893 TRIM32Q13049 653 aa23.86■■□□□ 1.41
LTBP4-232ENST00000610893 CTR9Q6PD62 1173 aa23.86■■□□□ 1.41
LTBP4-232ENST00000610893 STRBPQ96SI9 672 aaKnown RBP23.86■■□□□ 1.41
LTBP4-232ENST00000610893 TMX2Q9Y320 296 aa23.86■■□□□ 1.41
LTBP4-232ENST00000610893 NAV1Q8NEY1 1877 aa23.85■■□□□ 1.41
LTBP4-232ENST00000610893 CYP2D7A0A087X1C5 515 aa23.85■■□□□ 1.41
LTBP4-232ENST00000610893 AKR1B1P15121 316 aa23.85■■□□□ 1.41
LTBP4-232ENST00000610893 ZKSCAN1P17029 563 aaPredicted RBP23.85■■□□□ 1.41
LTBP4-232ENST00000610893 GIMAP6Q6P9H5 292 aa23.85■■□□□ 1.41
LTBP4-232ENST00000610893 NECAB2Q7Z6G3 386 aa23.85■■□□□ 1.41
LTBP4-232ENST00000610893 SIAH1Q8IUQ4 282 aa23.85■■□□□ 1.41
LTBP4-232ENST00000610893 BTBD7Q9P203 1132 aa23.85■■□□□ 1.41
LTBP4-232ENST00000610893 ARPP21Q9UBL0 812 aaPredicted RBP23.85■■□□□ 1.41
LTBP4-232ENST00000610893 COLQQ9Y215 455 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms