RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TRAF5O00463 557 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 C21orf2O43822 256 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 ERLIN1O75477 346 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CACNB3P54284 484 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 PNOCQ13519 176 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 NCAPH2Q6IBW4 605 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 HS2ST1Q7LGA3 356 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 RASGRP4Q8TDF6 673 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CSRNP1Q96S65 589 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CENPHQ9H3R5 247 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 DNAI1Q9UI46 699 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 MYO6Q9UM54 1294 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 POTEJP0CG39 1038 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 NPR1P16066 1061 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 NR5A1Q13285 461 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 POSTNQ15063 836 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CALCRLQ16602 461 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CEP135Q66GS9 1140 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 TMC4Q7Z404 712 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 GAS2L3Q86XJ1 694 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
CSDE1-218ENST00000610726 MPHOSPH6Q99547 160 aaKnown RBP8.2□□□□□ -1.1
CSDE1-218ENST00000610726 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.2□□□□□ -1.16e-7■■■■■ 114.9
CSDE1-218ENST00000610726 CTNND2Q9UQB3 1225 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CPDO75976 1380 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CARMIL3Q8ND23 1372 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 USP17L3A6NCW0 530 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 USP17L4A6NCW7 530 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 TMCO5BA8MYB1 307 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 SH2B2O14492 632 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CYP2D6P10635 497 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 SLFN13Q68D06 897 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 MAEAQ7L5Y9 396 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 USP17L1Q7RTZ2 530 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 FERMT2Q96AC1 680 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 TMOD4Q9NZQ9 345 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 PUF60Q9UHX1 559 aaKnown RBP8.2□□□□□ -1.1
CSDE1-218ENST00000610726 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.2□□□□□ -1.12e-8■■□□□ 11.7
CSDE1-218ENST00000610726 BICDL2A1A5D9 508 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CAMTA2O94983 1202 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 GDF11O95390 407 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 ZNF827Q17R98 1081 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 TBC1D10CQ8IV04 446 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 PDCL2Q8N4E4 241 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 LINC00116Q8NCU8 138 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 DRC1Q96MC2 740 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 CD209Q9NNX6 404 aa8.2□□□□□ -1.1
CSDE1-218ENST00000610726 MACROD2A1Z1Q3 448 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 TMEM232C9JQI7 657 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 DDAH1O94760 285 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 PCP11498 1178 aaKnown RBP8.19□□□□□ -1.1
CSDE1-218ENST00000610726 KRT13P13646 458 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 RDXP35241 583 aaKnown RBP8.19□□□□□ -1.1
CSDE1-218ENST00000610726 CDR1P51861 262 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 TOB2Q14106 344 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-218ENST00000610726 ZNF34Q8IZ26 560 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 FAM84BQ96KN1 310 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-218ENST00000610726 PSTPIP2Q9H939 334 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 TBC1D7Q9P0N9 293 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 MAP2P11137 1827 aaKnown RBP8.19□□□□□ -1.1
CSDE1-218ENST00000610726 SPATA31A5Q5VU36 1347 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 SPATA31A7Q8IWB4 1347 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 ADRA2BP18089 450 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 SLC16A2P36021 539 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 PAFAH1B1P43034 410 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 NDUFA8P51970 172 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 PTGDRQ13258 359 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 TNFAIP1Q13829 316 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 NKX1-1Q15270 411 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-218ENST00000610726 ABCB5Q2M3G0 1257 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 HERC4Q5GLZ8 1057 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-218ENST00000610726 IQCEQ6IPM2 695 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 USP17L2Q6R6M4 530 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 CABP7Q86V35 215 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 CCDC65Q8IXS2 484 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 MASTLQ96GX5 879 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 GLT8D2Q9H1C3 349 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 JADE2Q9NQC1 790 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 RNF216Q9NWF9 866 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-218ENST00000610726 KIAA1468Q9P260 1216 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 MST1RQ04912 1400 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 PAF1Q8N7H5 531 aa8.19□□□□□ -1.1
CSDE1-218ENST00000610726 A0A087WWV3 80 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 ERLIN2O94905 339 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 TECP42680 631 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 FANCCQ00597 558 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 EN1Q05925 392 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 TBC1D8BQ0IIM8 1120 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 PRPF4BQ13523 1007 aaKnown RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 KCTD1Q719H9 257 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 SLC44A5Q8NCS7 719 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 SH3RF3Q8TEJ3 882 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 CHURC1Q8WUH1 139 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 NAP1L4Q99733 375 aaKnown RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 RNF26Q9BY78 433 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-218ENST00000610726 GOPCQ9HD26 462 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 PCDHA1Q9Y5I3 950 aa8.18□□□□□ -1.1
CSDE1-218ENST00000610726 MEGF6O75095 1541 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms