RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 SLC44A5Q8NCS7 719 aa17.02■□□□□ 0.32
HDDC2-209ENST00000609477 SH2D4AQ9H788 454 aa17.02■□□□□ 0.32
HDDC2-209ENST00000609477 KANSL2Q9H9L4 492 aa17.02■□□□□ 0.32
HDDC2-209ENST00000609477 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
HDDC2-209ENST00000609477 HSPD1P10809 573 aaKnown RBP17.01■□□□□ 0.31
HDDC2-209ENST00000609477 GSPT1P15170 499 aaKnown RBP17.01■□□□□ 0.31
HDDC2-209ENST00000609477 OSBPP22059 807 aa17.01■□□□□ 0.31
HDDC2-209ENST00000609477 GUCY1A2P33402 732 aa17.01■□□□□ 0.31
HDDC2-209ENST00000609477 EVX2Q03828 476 aa17.01■□□□□ 0.31
HDDC2-209ENST00000609477 SEPT2Q15019 361 aa17.01■□□□□ 0.31
HDDC2-209ENST00000609477 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
HDDC2-209ENST00000609477 ANAPC4Q9UJX5 808 aa17.01■□□□□ 0.31
HDDC2-209ENST00000609477 ADGRA2Q96PE1 1338 aa17■□□□□ 0.31
HDDC2-209ENST00000609477 FOXP2O15409 715 aa17■□□□□ 0.31
HDDC2-209ENST00000609477 GNRH1P01148 92 aa17■□□□□ 0.31
HDDC2-209ENST00000609477 PPARAQ07869 468 aa17■□□□□ 0.31
HDDC2-209ENST00000609477 KIF22Q14807 665 aa17■□□□□ 0.31
HDDC2-209ENST00000609477 SHROOM1Q2M3G4 852 aaPredicted RBP17■□□□□ 0.31
HDDC2-209ENST00000609477 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
HDDC2-209ENST00000609477 ZNF444Q8N0Y2 327 aaPredicted RBP17■□□□□ 0.31
HDDC2-209ENST00000609477 RUFY2Q8WXA3 655 aa17■□□□□ 0.31
HDDC2-209ENST00000609477 FEZ1Q99689 392 aa17■□□□□ 0.31
HDDC2-209ENST00000609477 ARHGEF10LQ9HCE6 1279 aa17■□□□□ 0.31
HDDC2-209ENST00000609477 RAD50Q92878 1312 aa16.99■□□□□ 0.31
HDDC2-209ENST00000609477 FGAP02671 866 aa16.99■□□□□ 0.31
HDDC2-209ENST00000609477 PCP11498 1178 aaKnown RBP16.99■□□□□ 0.31
HDDC2-209ENST00000609477 AKR1B1P15121 316 aa16.99■□□□□ 0.31
HDDC2-209ENST00000609477 RASA1P20936 1047 aa16.99■□□□□ 0.31
HDDC2-209ENST00000609477 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
HDDC2-209ENST00000609477 NT5C2P49902 561 aa16.99■□□□□ 0.31
HDDC2-209ENST00000609477 DGKZQ13574 1117 aa16.99■□□□□ 0.31
HDDC2-209ENST00000609477 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
HDDC2-209ENST00000609477 SMCR8Q8TEV9 937 aaPredicted RBP16.99■□□□□ 0.31
HDDC2-209ENST00000609477 GTF3C2Q8WUA4 911 aaPredicted RBP16.99■□□□□ 0.31
HDDC2-209ENST00000609477 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
HDDC2-209ENST00000609477 CYP2C8P10632 490 aa16.98■□□□□ 0.31
HDDC2-209ENST00000609477 BCRP11274 1271 aa16.98■□□□□ 0.31
HDDC2-209ENST00000609477 ICA1Q05084 483 aa16.98■□□□□ 0.31
HDDC2-209ENST00000609477 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
HDDC2-209ENST00000609477 VPS53Q5VIR6 699 aa16.98■□□□□ 0.31
HDDC2-209ENST00000609477 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
HDDC2-209ENST00000609477 LPAR1Q92633 364 aa16.98■□□□□ 0.31
HDDC2-209ENST00000609477 SYNPO2Q9UMS6 1093 aa16.98■□□□□ 0.31
HDDC2-209ENST00000609477 TMX2Q9Y320 296 aa16.98■□□□□ 0.31
HDDC2-209ENST00000609477 SMIM22K7EJ46 135 aa16.97■□□□□ 0.31
HDDC2-209ENST00000609477 FGRP09769 529 aa16.97■□□□□ 0.31
HDDC2-209ENST00000609477 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
HDDC2-209ENST00000609477 LACTBP83111 547 aaPredicted RBP16.97■□□□□ 0.31
HDDC2-209ENST00000609477 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
HDDC2-209ENST00000609477 DSCC1Q9BVC3 393 aa16.97■□□□□ 0.31
HDDC2-209ENST00000609477 MCOLN1Q9GZU1 580 aa16.97■□□□□ 0.31
HDDC2-209ENST00000609477 ASCC2Q9H1I8 757 aaPredicted RBP16.97■□□□□ 0.31
HDDC2-209ENST00000609477 GREB1LQ9C091 1923 aaPredicted RBP16.97■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L15C9J2P7 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L13C9JLJ4 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L11C9JVI0 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L18D6R9N7 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L22D6RA61 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L17D6RBQ6 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L19D6RCP7 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L20D6RJB6 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 PRMT2P55345 433 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 USP17L24Q0WX57 530 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 FAM110CQ1W6H9 321 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 EFCC1Q9HA90 598 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 NYAP2Q9P242 653 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 CPA4Q9UI42 421 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 CTNNA3Q9UI47 895 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 PLIN4Q96Q06 1357 aa16.96■□□□□ 0.31
HDDC2-209ENST00000609477 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 ORC4O43929 436 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 VCAM1P19320 739 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 CHMLP26374 656 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 BMP2KLQ5H9B9 411 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 FBXO46Q6PJ61 603 aaPredicted RBP16.95■□□□□ 0.3
HDDC2-209ENST00000609477 OTOP1Q7RTM1 612 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 SIAH1Q8IUQ4 282 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 NEDD1Q8NHV4 660 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 CD99L2Q8TCZ2 262 aa16.95■□□□□ 0.3
HDDC2-209ENST00000609477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
HDDC2-209ENST00000609477 IGKV6D-41A0A0C4DH26 115 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 TSPY3P0CV98 308 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 TSPY8P0CW00 308 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 EEF2P13639 858 aaKnown RBP16.94■□□□□ 0.3
HDDC2-209ENST00000609477 HOXD10P28358 340 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 LBX2Q6XYB7 198 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 CATSPERGQ6ZRH7 1159 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 MKL1Q969V6 931 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.94■□□□□ 0.3
HDDC2-209ENST00000609477 RNF41Q9H4P4 317 aaPredicted RBP16.94■□□□□ 0.3
HDDC2-209ENST00000609477 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 GOPCQ9HD26 462 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 TRIM17Q9Y577 477 aa16.94■□□□□ 0.3
HDDC2-209ENST00000609477 ZNF213O14771 459 aa16.93■□□□□ 0.3
HDDC2-209ENST00000609477 HERVK_113P62684 666 aa16.93■□□□□ 0.3
HDDC2-209ENST00000609477 ZYXQ15942 572 aaKnown RBP16.93■□□□□ 0.3
HDDC2-209ENST00000609477 STK11IPQ8N1F8 1099 aa16.93■□□□□ 0.3
HDDC2-209ENST00000609477 P2RX7Q99572 595 aaKnown RBP16.93■□□□□ 0.3
HDDC2-209ENST00000609477 MTMR4Q9NYA4 1195 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms