RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 ANKLE1Q8NAG6 615 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 ACER1Q8TDN7 264 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 GTF3C2Q8WUA4 911 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP6NLQ92738 828 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 FEZ1Q99689 392 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 PDE6AP16499 860 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 SHMT1P34896 483 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 USP14P54578 494 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 MAP3K21Q5TCX8 1036 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 CATSPERGQ6ZRH7 1159 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 PLEKHH3Q7Z736 793 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 SOCS4Q8WXH5 440 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 CRNKL1Q9BZJ0 848 aaKnown RBP16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 RABGAP1Q9Y3P9 1069 aa16.24■□□□□ 0.19
POLR2J3-219ENST00000608621 ZNF532Q9HCE3 1301 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 GOLIM4O00461 696 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 CNMDO75829 334 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 PRKAR2AP13861 404 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 MNX1P50219 401 aaPredicted RBP16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 CACNB2Q08289 660 aaPredicted RBP16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 CCL14Q16627 93 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 MORN1Q5T089 497 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 SIRT2Q8IXJ6 389 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 TRMT44Q8IYL2 757 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 DNAJC2Q99543 621 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 NBPF3Q9H094 633 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 CWC22Q9HCG8 908 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 MCM9Q9NXL9 1143 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 OGDHLQ9ULD0 1010 aa16.23■□□□□ 0.19
POLR2J3-219ENST00000608621 HMMRO75330 724 aa16.22■□□□□ 0.19
POLR2J3-219ENST00000608621 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
POLR2J3-219ENST00000608621 RGS2P41220 211 aa16.22■□□□□ 0.19
POLR2J3-219ENST00000608621 EVX2Q03828 476 aa16.22■□□□□ 0.19
POLR2J3-219ENST00000608621 GABPAQ06546 454 aa16.22■□□□□ 0.19
POLR2J3-219ENST00000608621 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
POLR2J3-219ENST00000608621 STAP2Q9UGK3 403 aa16.22■□□□□ 0.19
POLR2J3-219ENST00000608621 DDX19BQ9UMR2 479 aa16.22■□□□□ 0.19
POLR2J3-219ENST00000608621 TCRBV5S4A2TA0A5A2 114 aa16.21■□□□□ 0.19
POLR2J3-219ENST00000608621 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
POLR2J3-219ENST00000608621 ZKSCAN1P17029 563 aaPredicted RBP16.21■□□□□ 0.19
POLR2J3-219ENST00000608621 VCAM1P19320 739 aa16.21■□□□□ 0.19
POLR2J3-219ENST00000608621 CCNA1P78396 465 aa16.21■□□□□ 0.19
POLR2J3-219ENST00000608621 SEPT2Q15019 361 aa16.21■□□□□ 0.19
POLR2J3-219ENST00000608621 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
POLR2J3-219ENST00000608621 C11orf49Q9H6J7 331 aa16.21■□□□□ 0.19
POLR2J3-219ENST00000608621 ALPK3Q96L96 1907 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 MPHOSPH10O00566 681 aaKnown RBP16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 CCND3P30281 292 aaPredicted RBP16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 MAP2K5Q13163 448 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 WDR78Q5VTH9 848 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 LBX2Q6XYB7 198 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 C7orf61Q8IZ16 206 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 RPAP3Q9H6T3 665 aaPredicted RBP16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 ARMT1Q9H993 441 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 DCP1AQ9NPI6 582 aaPredicted RBP16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 BTBD7Q9P203 1132 aa16.2■□□□□ 0.18
POLR2J3-219ENST00000608621 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
POLR2J3-219ENST00000608621 GLRX3O76003 335 aaKnown RBP16.19■□□□□ 0.18
POLR2J3-219ENST00000608621 CYP2D6P10635 497 aa16.19■□□□□ 0.18
POLR2J3-219ENST00000608621 PTPREP23469 700 aa16.19■□□□□ 0.18
POLR2J3-219ENST00000608621 SLFNL1Q499Z3 407 aa16.19■□□□□ 0.18
POLR2J3-219ENST00000608621 APBA2Q99767 749 aa16.19■□□□□ 0.18
POLR2J3-219ENST00000608621 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
POLR2J3-219ENST00000608621 ZMYND8Q9ULU4 1186 aaPredicted RBP16.19■□□□□ 0.18
POLR2J3-219ENST00000608621 A0A1W2PPC1 479 aa16.18■□□□□ 0.18
POLR2J3-219ENST00000608621 SLC15A5A6NIM6 579 aa16.18■□□□□ 0.18
POLR2J3-219ENST00000608621 SPDYE16A6NNV3 312 aaPredicted RBP16.18■□□□□ 0.18
POLR2J3-219ENST00000608621 PRKAB2O43741 272 aa16.18■□□□□ 0.18
POLR2J3-219ENST00000608621 LHX8Q68G74 356 aa16.18■□□□□ 0.18
POLR2J3-219ENST00000608621 DYNLL2Q96FJ2 89 aa16.18■□□□□ 0.18
POLR2J3-219ENST00000608621 ATP5JP18859 108 aa16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 ADD2P35612 726 aa16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 COG2Q14746 738 aa16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 SLC44A5Q8NCS7 719 aa16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 GDF15Q99988 308 aa16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 HOXC10Q9NYD6 342 aa16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 FLRT1Q9NZU1 646 aa16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 IVNS1ABPQ9Y6Y0 642 aa16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 RANBP2P49792 3224 aaKnown RBP16.17■□□□□ 0.18
POLR2J3-219ENST00000608621 DDX60LQ5H9U9 1706 aaKnown RBP16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 NAV1Q8NEY1 1877 aa16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 MBD4O95243 580 aa16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 SYN1P17600 705 aa16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 MFSD14CQ5VZR4 134 aa16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 NPLOC4Q8TAT6 608 aa16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms