RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
CTSA-213ENST00000606782 ATP8A2Q9NTI2 1148 aa16.11■□□□□ 0.17
CTSA-213ENST00000606782 SGPL1O95470 568 aa16.1■□□□□ 0.17
CTSA-213ENST00000606782 INHAP05111 366 aa16.1■□□□□ 0.17
CTSA-213ENST00000606782 LBX2Q6XYB7 198 aa16.1■□□□□ 0.17
CTSA-213ENST00000606782 U2AF1L4Q8WU68 220 aaKnown RBP16.1■□□□□ 0.17
CTSA-213ENST00000606782 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
CTSA-213ENST00000606782 PAK6Q9NQU5 681 aaPredicted RBP16.1■□□□□ 0.17
CTSA-213ENST00000606782 NAV1Q8NEY1 1877 aa16.1■□□□□ 0.17
CTSA-213ENST00000606782 USP17L15C9J2P7 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 USP17L13C9JLJ4 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 USP17L11C9JVI0 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 USP17L18D6R9N7 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 USP17L22D6RA61 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 USP17L17D6RBQ6 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 USP17L19D6RCP7 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 USP17L20D6RJB6 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 USP17L24Q0WX57 530 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 RAB3GAP1Q15042 981 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 Q3C1V9 767 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 ACER1Q8TDN7 264 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 ARMT1Q9H993 441 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 SWAP70Q9UH65 585 aa16.09■□□□□ 0.17
CTSA-213ENST00000606782 PLXNB2O15031 1838 aa16.08■□□□□ 0.17
CTSA-213ENST00000606782 PRKAB2O43741 272 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 SMARCA5O60264 1052 aaPredicted RBP16.08■□□□□ 0.16
CTSA-213ENST00000606782 MBD4O95243 580 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 XRCC5P13010 732 aaKnown RBP16.08■□□□□ 0.16
CTSA-213ENST00000606782 MAPK4P31152 587 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 ERVK-9P63128 1117 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 ERVK-24P63145 666 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 EVX2Q03828 476 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 SEPT2Q15019 361 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 SLFNL1Q499Z3 407 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 USP6NLQ92738 828 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 RABGAP1Q9Y3P9 1069 aa16.08■□□□□ 0.16
CTSA-213ENST00000606782 HMGCRP04035 888 aa16.07■□□□□ 0.16
CTSA-213ENST00000606782 CYP2D6P10635 497 aa16.07■□□□□ 0.16
CTSA-213ENST00000606782 VCAM1P19320 739 aa16.07■□□□□ 0.16
CTSA-213ENST00000606782 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
CTSA-213ENST00000606782 FEZ1Q99689 392 aa16.07■□□□□ 0.16
CTSA-213ENST00000606782 PPP4R2Q9NY27 417 aa16.07■□□□□ 0.16
CTSA-213ENST00000606782 MYH7P12883 1935 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 A0A1W2PRG0 241 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 PEX10O60683 326 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 CNMDO75829 334 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 CHGBP05060 677 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 TMEM179Q6ZVK1 233 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 SOCS4Q8WXH5 440 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 CCDC17Q96LX7 622 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 PUS7LQ9H0K6 701 aaKnown RBP16.06■□□□□ 0.16
CTSA-213ENST00000606782 BCL11AQ9H165 835 aa16.06■□□□□ 0.16
CTSA-213ENST00000606782 RPTORQ8N122 1335 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 ZYXQ15942 572 aaKnown RBP16.05■□□□□ 0.16
CTSA-213ENST00000606782 MORN1Q5T089 497 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 MAP3K21Q5TCX8 1036 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 SIAH1Q8IUQ4 282 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
CTSA-213ENST00000606782 KBTBD3Q8NAB2 608 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 SLC44A5Q8NCS7 719 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 TRIB2Q92519 343 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 DEFB118Q96PH6 123 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTSA-213ENST00000606782 PORCNQ9H237 461 aa16.05■□□□□ 0.16
CTSA-213ENST00000606782 BAZ2AQ9UIF9 1905 aaKnown RBP16.04■□□□□ 0.16
CTSA-213ENST00000606782 USP17L12C9JPN9 530 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 USP17L21D6R901 530 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 FARP2O94887 1054 aaPredicted RBP16.04■□□□□ 0.16
CTSA-213ENST00000606782 CDK8P49336 464 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 CCNA1P78396 465 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 HABP4Q5JVS0 413 aaKnown RBP16.04■□□□□ 0.16
CTSA-213ENST00000606782 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 GPR142Q7Z601 462 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 PLEKHH3Q7Z736 793 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 DYNLL2Q96FJ2 89 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
CTSA-213ENST00000606782 HTATIP2Q9BUP3 242 aa16.04■□□□□ 0.16
CTSA-213ENST00000606782 RPAP3Q9H6T3 665 aaPredicted RBP16.04■□□□□ 0.16
CTSA-213ENST00000606782 SPDYE16A6NNV3 312 aaPredicted RBP16.03■□□□□ 0.16
CTSA-213ENST00000606782 TFRCP02786 760 aaKnown RBP16.03■□□□□ 0.16
CTSA-213ENST00000606782 CYP2B6P20813 491 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 ANKRD45Q5TZF3 282 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 DDRGK1Q96HY6 314 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 CCDC136Q96JN2 1154 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 HMX1Q9NP08 348 aaPredicted RBP16.03■□□□□ 0.16
CTSA-213ENST00000606782 HOXC10Q9NYD6 342 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 TMX2Q9Y320 296 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 SLC4A4Q9Y6R1 1079 aa16.03■□□□□ 0.16
CTSA-213ENST00000606782 TRIOBPQ9H2D6 2365 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms