RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 AKR1B1P15121 316 aa16.92■□□□□ 0.3
CTSA-211ENST00000606066 RASA1P20936 1047 aa16.92■□□□□ 0.3
CTSA-211ENST00000606066 NT5C2P49902 561 aa16.92■□□□□ 0.3
CTSA-211ENST00000606066 CTDSPL2Q05D32 466 aa16.92■□□□□ 0.3
CTSA-211ENST00000606066 CCDC84Q86UT8 332 aaPredicted RBP16.92■□□□□ 0.3
CTSA-211ENST00000606066 IFNL1Q8IU54 200 aa16.92■□□□□ 0.3
CTSA-211ENST00000606066 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.92■□□□□ 0.3
CTSA-211ENST00000606066 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 A0A0G2JLL6 359 aaPredicted RBP16.91■□□□□ 0.3
CTSA-211ENST00000606066 C19orf81C9J6K1 198 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 PRDM1O75626 825 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 HAND2P61296 217 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 SEPT2Q15019 361 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 SHROOM1Q2M3G4 852 aaPredicted RBP16.91■□□□□ 0.3
CTSA-211ENST00000606066 MFSD6Q6ZSS7 791 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 PRRT2Q7Z6L0 340 aaPredicted RBP16.91■□□□□ 0.3
CTSA-211ENST00000606066 BRI3BPQ8WY22 251 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 KANSL2Q9H9L4 492 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 ANO2Q9NQ90 1003 aa16.91■□□□□ 0.3
CTSA-211ENST00000606066 ORC4O43929 436 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 FGRP09769 529 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 TSPY3P0CV98 308 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 TSPY8P0CW00 308 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 BACE1P56817 501 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 PTH1RQ03431 593 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 AKNAD1Q5T1N1 836 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 STAG1Q8WVM7 1258 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 FEZ1Q99689 392 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 ARHGEF10LQ9HCE6 1279 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 ZCCHC17Q9NP64 241 aaKnown RBP16.9■□□□□ 0.3
CTSA-211ENST00000606066 TOMM22Q9NS69 142 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 TMOD4Q9NZQ9 345 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
CTSA-211ENST00000606066 GTF3C3Q9Y5Q9 886 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
CTSA-211ENST00000606066 HTTP42858 3142 aa16.9■□□□□ 0.3
CTSA-211ENST00000606066 MKI67P46013 3256 aaKnown RBP16.89■□□□□ 0.29
CTSA-211ENST00000606066 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 GUCY1A2P33402 732 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 USP14P54578 494 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 TFAP4Q01664 338 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 ICA1Q05084 483 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 MTMR2Q13614 643 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 SH3D19Q5HYK7 790 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 PPP4R3BQ5MIZ7 849 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 PROCA1Q8NCQ7 364 aaPredicted RBP16.89■□□□□ 0.29
CTSA-211ENST00000606066 PTPN18Q99952 460 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
CTSA-211ENST00000606066 DOCK1Q14185 1865 aa16.88■□□□□ 0.29
CTSA-211ENST00000606066 IGF2BP3O00425 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTSA-211ENST00000606066 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
CTSA-211ENST00000606066 USP17L2Q6R6M4 530 aa16.88■□□□□ 0.29
CTSA-211ENST00000606066 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
CTSA-211ENST00000606066 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
CTSA-211ENST00000606066 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
CTSA-211ENST00000606066 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
CTSA-211ENST00000606066 LSG1Q9H089 658 aaKnown RBP16.88■□□□□ 0.29
CTSA-211ENST00000606066 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
CTSA-211ENST00000606066 BTBD19C9JJ37 291 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 HMGCS2P54868 508 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTSA-211ENST00000606066 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
CTSA-211ENST00000606066 TBC1D10CQ8IV04 446 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 ESR2Q92731 530 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTSA-211ENST00000606066 CNNM2Q9H8M5 875 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 INCENPQ9NQS7 918 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 SLC45A1Q9Y2W3 748 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 TRIM17Q9Y577 477 aa16.87■□□□□ 0.29
CTSA-211ENST00000606066 RBM8AQ9Y5S9 174 aaKnown RBP16.87■□□□□ 0.29
CTSA-211ENST00000606066 EIF5BO60841 1220 aaKnown RBP16.86■□□□□ 0.29
CTSA-211ENST00000606066 REC8O95072 547 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 TRDNQ13061 729 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 MOGSQ13724 837 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 FAM43AQ8N2R8 423 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 ACER1Q8TDN7 264 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 KRT23Q9C075 422 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 NYAP2Q9P242 653 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 AGTPBP1Q9UPW5 1226 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 PLIN4Q96Q06 1357 aa16.86■□□□□ 0.29
CTSA-211ENST00000606066 IGKV6D-41A0A0C4DH26 115 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 PDHXO00330 501 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 CYP21A2P08686 494 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 EEF2P13639 858 aaKnown RBP16.85■□□□□ 0.29
CTSA-211ENST00000606066 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 GPAT2Q6NUI2 795 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 ERO1AQ96HE7 468 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 C12orf42Q96LP6 360 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 ZFYVE28Q9HCC9 887 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 PNMA3Q9UL41 463 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 PTPN22Q9Y2R2 807 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
CTSA-211ENST00000606066 LAMB1P07942 1786 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 A0A1W2PRG0 241 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms