RNA–Protein interactions for RNA: ENST00000602998.1

SH3YL1-227, Transcript of SH3 and SYLF domain containing 1, humanhuman

Gene SH3YL1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-227ENST00000602998 HDAC5Q9UQL6 1122 aa12.13□□□□□ -0.47
SH3YL1-227ENST00000602998 C19orf81C9J6K1 198 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 GNAI2P04899 355 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 UQCRFS1P1P0C7P4 283 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 MAPK4P31152 587 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 RGS2P41220 211 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 TNNI3KQ59H18 835 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 TTC39AQ5SRH9 613 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 FOXP4Q8IVH2 680 aaPredicted RBP12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 MIGA1Q8NAN2 632 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 NPLOC4Q8TAT6 608 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 SOCS4Q8WXH5 440 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 COL25A1Q9BXS0 654 aaPredicted RBP12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 C1orf115Q9H7X2 142 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 FPGT-TNNI3KV9GXZ4 949 aa12.12□□□□□ -0.47
SH3YL1-227ENST00000602998 RLFQ13129 1914 aa12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 MYO9BQ13459 2157 aa12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 BAG3O95817 575 aa12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 MAP2K5Q13163 448 aa12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 USP17L2Q6R6M4 530 aa12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 APBA2Q99767 749 aa12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 LTBP2Q14767 1821 aa12.11□□□□□ -0.47
SH3YL1-227ENST00000602998 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 CYP7A1P22680 504 aa12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 CYP2C19P33261 490 aa12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 GUCY1A2P33402 732 aa12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 WDR78Q5VTH9 848 aa12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 CCAR1Q8IX12 1150 aaKnown RBP12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 TMEM57Q8N5G2 664 aa12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 FRAT1Q92837 279 aaPredicted RBP12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 EDC3Q96F86 508 aaKnown RBP12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 CCDC8Q9H0W5 538 aaPredicted RBP12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 ANTXR1Q9H6X2 564 aa12.1□□□□□ -0.47
SH3YL1-227ENST00000602998 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 IGHA2P01877 340 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 PLCG2P16885 1265 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 VCAM1P19320 739 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 PTPREP23469 700 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 PLCD1P51178 756 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 ATF7IPQ6VMQ6 1270 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 CATSPERGQ6ZRH7 1159 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 EAF2Q96CJ1 260 aaPredicted RBP12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 C12orf42Q96LP6 360 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 TRIM34Q9BYJ4 488 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 RABGAP1Q9Y3P9 1069 aa12.09□□□□□ -0.47
SH3YL1-227ENST00000602998 SPDYE16A6NNV3 312 aaPredicted RBP12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 IDH1O75874 414 aaKnown RBP12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 CNGA1P29973 690 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 SHMT1P34896 483 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 KIAA1755Q5JYT7 1200 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 CCDC158Q5M9N0 1113 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 C9orf50Q5SZB4 431 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 GJC2Q5T442 439 aaPredicted RBP12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 TRMT44Q8IYL2 757 aaKnown RBP12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 MAGEB6Q8N7X4 407 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 SSH3Q8TE77 659 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 FEZ1Q99689 392 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 GPR108Q9NPR9 543 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 DDX20Q9UHI6 824 aaKnown RBP12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 MUC3AQ02505 3323 aa12.08□□□□□ -0.48
SH3YL1-227ENST00000602998 A0A1W2PRG0 241 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 SLC15A5A6NIM6 579 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 SURF6O75683 361 aaKnown RBP12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 HLA-DOAP06340 250 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 RTP1P59025 263 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 ATP8B2P98198 1209 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 GRB14Q14449 540 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 RPAP3Q9H6T3 665 aaPredicted RBP12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 CWC22Q9HCG8 908 aaKnown RBP12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 SERPINB13Q9UIV8 391 aa12.07□□□□□ -0.48
SH3YL1-227ENST00000602998 SMIM22K7EJ46 135 aa12.06□□□□□ -0.48
SH3YL1-227ENST00000602998 COBLO75128 1261 aa12.06□□□□□ -0.48
SH3YL1-227ENST00000602998 HOXC6P09630 235 aa12.06□□□□□ -0.48
SH3YL1-227ENST00000602998 CYBAP13498 195 aa12.06□□□□□ -0.48
SH3YL1-227ENST00000602998 USP5P45974 858 aa12.06□□□□□ -0.48
SH3YL1-227ENST00000602998 ATP2B2Q01814 1243 aa12.06□□□□□ -0.48
SH3YL1-227ENST00000602998 OS9Q13438 667 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms