RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TONSLQ96HA7 1378 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 NLRP1Q9C000 1473 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 PREX2Q70Z35 1606 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 GTPBP10A4D1E9 387 aaKnown RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 ZBBXA8MT70 800 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 F8W031 263 aaPredicted RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 APAF1O14727 1248 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 TIPRLO75663 272 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 DAB2P98082 770 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 CHAF1AQ13111 956 aaPredicted RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 GIMAP8Q8ND71 665 aaPredicted RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 OSBPL5Q9H0X9 879 aaPredicted RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 DIAPH3Q9NSV4 1193 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 DCAF16Q9NXF7 216 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 SUN2Q9UH99 717 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 JRKLQ9Y4A0 524 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 INO80Q9ULG1 1556 aaPredicted RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 PLCH2O75038 1416 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 TREHO43280 583 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 MTHFD1P11586 935 aaKnown RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 TNNT1P13805 278 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 ENPP1P22413 925 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 STK3Q13188 491 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 ZSCAN26Q16670 478 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 MUM1L1Q5H9M0 696 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 WDR45BQ5MNZ6 344 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 GJC2Q5T442 439 aaPredicted RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 CELF2-AS1Q8N7Q2 184 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 SMARCC1Q92922 1105 aaPredicted RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 IWS1Q96ST2 819 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 CARMIL1Q5VZK9 1371 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 ANKRD18BA2A2Z9 1011 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 SSBP05455 408 aaKnown RBP eCLIP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 U2AF2P26368 475 aaKnown RBP eCLIP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 HPDP32754 393 aaPredicted RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 PLA2G4AP47712 749 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 TRPC1P48995 793 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 RRP1P56182 461 aaKnown RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 GALNT17Q6IS24 598 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 CCDC73Q6ZRK6 1079 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 RSRC2Q7L4I2 434 aaKnown RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 EEPD1Q7L9B9 569 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 TPH2Q8IWU9 490 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 ARL6IP6Q8N6S5 226 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 TRIML1Q8N9V2 468 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 MTMR8Q96EF0 704 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 DEF6Q9H4E7 631 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 SMYD2Q9NRG4 433 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 KIDINS220Q9ULH0 1771 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 KANK1Q14678 1352 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 STRCP1A6NGW2 1772 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 KIF5CO60282 957 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 REC8O95072 547 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 STAU1O95793 577 aaKnown RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 NASPP49321 788 aaPredicted RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 MLC1Q15049 377 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 PKN2Q16513 984 aaKnown RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 CDCA2Q69YH5 1023 aaPredicted RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 LYPD8Q6UX82 237 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 DZIP3Q86Y13 1208 aaKnown RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 SPNS2Q8IVW8 549 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 KLHL23Q8NBE8 558 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 NEK9Q8TD19 979 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 NUDT16Q96DE0 195 aaKnown RBP5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 SPAG5Q96R06 1193 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 ST7Q9NRC1 585 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 GGT7Q9UJ14 662 aa5.77□□□□□ -1.49
SPTBN1-206ENST00000602898 HTATSF1O43719 755 aaKnown RBP5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 GJA8P48165 433 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 GUCY2FP51841 1108 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 RCAN1P53805 252 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 CLDN10P78369 228 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 FMR1Q06787 632 aaKnown RBP eCLIP5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 MTMR1Q13613 665 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 MMS22LQ6ZRQ5 1243 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 KIAA0825Q8IV33 1275 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 RPGRQ92834 1020 aaKnown RBP5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 PDLIM2Q96JY6 352 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 C2orf49Q9BVC5 232 aaPredicted RBP5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 COPRSQ9NQ92 184 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 ARHGAP23Q9P227 1491 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 TOR1BO14657 336 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 GFPT2O94808 682 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 F12P00748 615 aaPredicted RBP5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 IRX1P78414 480 aaPredicted RBP5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 LMNB2Q03252 620 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 APOBRQ0VD83 1088 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 SYCP1Q15431 976 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 C4orf48Q5BLP8 95 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 FAM117BQ6P1L5 589 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 C11orf74Q86VG3 221 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 ENAHQ8N8S7 591 aaPredicted RBP5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 FOXJ1Q92949 421 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 TTC14Q96N46 770 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 FBXL5Q9UKA1 691 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 CEP131Q9UPN4 1083 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 KIAA1024Q9UPX6 916 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 IKBKGQ9Y6K9 419 aa5.76□□□□□ -1.49
SPTBN1-206ENST00000602898 SLC4A7Q9Y6M7 1214 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 285.4 ms