RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 IFNAR1P17181 557 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 TNNI2P48788 182 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 TNFAIP1Q13829 316 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 NTRK3Q16288 839 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 RTN1Q16799 776 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 MICU3Q86XE3 530 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 CNOT7Q9UIV1 285 aaKnown RBP16.78■□□□□ 0.28
ZNF548-212ENST00000602086 CNTNAP1P78357 1384 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 H7C1D1 291 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 JAK2O60674 1132 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 VEGFAP15692 232 aaPredicted RBP16.77■□□□□ 0.28
ZNF548-212ENST00000602086 CDC27P30260 824 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 CACNB3P54284 484 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 MAP3K10Q02779 954 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 TCP10Q12799 353 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 PKP1Q13835 747 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 MICALL2Q8IY33 904 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.28
ZNF548-212ENST00000602086 KAT14Q9H8E8 782 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 MTMR6Q9Y217 621 aa16.77■□□□□ 0.28
ZNF548-212ENST00000602086 POTECB2RU33 542 aa16.76■□□□□ 0.27
ZNF548-212ENST00000602086 HSPA1AP0DMV8 641 aaKnown RBP16.76■□□□□ 0.27
ZNF548-212ENST00000602086 HSPA1BP0DMV9 641 aaKnown RBP16.76■□□□□ 0.27
ZNF548-212ENST00000602086 ADD1P35611 737 aaKnown RBP16.76■□□□□ 0.27
ZNF548-212ENST00000602086 NFKBIBQ15653 356 aa16.76■□□□□ 0.27
ZNF548-212ENST00000602086 ZSCAN29Q8IWY8 852 aaPredicted RBP16.76■□□□□ 0.27
ZNF548-212ENST00000602086 TNS4Q8IZW8 715 aa16.76■□□□□ 0.27
ZNF548-212ENST00000602086 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.76■□□□□ 0.27
ZNF548-212ENST00000602086 DNAJC18Q9H819 358 aa16.76■□□□□ 0.27
ZNF548-212ENST00000602086 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
ZNF548-212ENST00000602086 GJA3Q9Y6H8 435 aa16.76■□□□□ 0.27
ZNF548-212ENST00000602086 CLRN2A0PK11 232 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 NMT2O60551 498 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
ZNF548-212ENST00000602086 FDPSP14324 419 aaKnown RBP16.75■□□□□ 0.27
ZNF548-212ENST00000602086 PTMSP20962 102 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 KIF5BP33176 963 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 NBPF9Q3BBW0 867 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 WASF1Q92558 559 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 MTMR4Q9NYA4 1195 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 GPRC5DQ9NZD1 345 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 ORC3Q9UBD5 711 aaPredicted RBP16.75■□□□□ 0.27
ZNF548-212ENST00000602086 PGAP2Q9UHJ9 254 aa16.75■□□□□ 0.27
ZNF548-212ENST00000602086 TCP10L2B9ZVM9 353 aa16.74■□□□□ 0.27
ZNF548-212ENST00000602086 FMNL1O95466 1100 aaPredicted RBP16.74■□□□□ 0.27
ZNF548-212ENST00000602086 F13A1P00488 732 aa16.74■□□□□ 0.27
ZNF548-212ENST00000602086 AKR1B1P15121 316 aa16.74■□□□□ 0.27
ZNF548-212ENST00000602086 GNAQP50148 359 aa16.74■□□□□ 0.27
ZNF548-212ENST00000602086 PNMA1Q8ND90 353 aa16.74■□□□□ 0.27
ZNF548-212ENST00000602086 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
ZNF548-212ENST00000602086 CSRNP1Q96S65 589 aa16.74■□□□□ 0.27
ZNF548-212ENST00000602086 TMEM47Q9BQJ4 181 aa16.74■□□□□ 0.27
ZNF548-212ENST00000602086 RNF26Q9BY78 433 aaPredicted RBP16.74■□□□□ 0.27
ZNF548-212ENST00000602086 SYNPO2Q9UMS6 1093 aa16.74■□□□□ 0.27
ZNF548-212ENST00000602086 POTEIP0CG38 1075 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 POTEJP0CG39 1038 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 SMARCA1P28370 1054 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 MCM4P33991 863 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 SSRP1Q08945 709 aaKnown RBP16.73■□□□□ 0.27
ZNF548-212ENST00000602086 GRM4Q14833 912 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 KIF4BQ2VIQ3 1234 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 CERKLQ49MI3 558 aaPredicted RBP16.73■□□□□ 0.27
ZNF548-212ENST00000602086 TMEM179Q6ZVK1 233 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 NBPF11Q86T75 865 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 NUP133Q8WUM0 1156 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 DDX11Q96FC9 970 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 CEP95Q96GE4 821 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 LZTS2Q9BRK4 669 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 MYL10Q9BUA6 226 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 VEZTQ9HBM0 779 aa16.73■□□□□ 0.27
ZNF548-212ENST00000602086 RBM27Q9P2N5 1060 aaKnown RBP16.73■□□□□ 0.27
ZNF548-212ENST00000602086 SHTN1A0MZ66 631 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 DDX11L8A8MPP1 907 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 BAG4O95429 457 aaKnown RBP16.72■□□□□ 0.27
ZNF548-212ENST00000602086 TTLL1O95922 423 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 RXRAP19793 462 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 APOBEC3FQ8IUX4 373 aaKnown RBP16.72■□□□□ 0.27
ZNF548-212ENST00000602086 MKL1Q969V6 931 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 ZSCAN16Q9H4T2 348 aaPredicted RBP16.72■□□□□ 0.27
ZNF548-212ENST00000602086 KANSL2Q9H9L4 492 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 GINM1Q9NU53 330 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 NYAP2Q9P242 653 aa16.72■□□□□ 0.27
ZNF548-212ENST00000602086 MYH6P13533 1939 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 GOLGA6L22H0YM25 854 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 H3BQV1 296 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
ZNF548-212ENST00000602086 DEXIO95424 95 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 FUT2Q10981 343 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 SAMD7Q7Z3H4 446 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 RAB11FIP4Q86YS3 637 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 FAM177A1Q8N128 213 aaPredicted RBP16.71■□□□□ 0.27
ZNF548-212ENST00000602086 HOOK2Q96ED9 719 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 STX8Q9UNK0 236 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 PPP2R3BQ9Y5P8 575 aa16.71■□□□□ 0.27
ZNF548-212ENST00000602086 PITPNM2Q9BZ72 1349 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms