RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 KIAA1683Q9H0B3 1180 aa28.21■■■□□ 2.11
GTPBP3-227ENST00000602056 HMMRO75330 724 aa28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 IFIT2P09913 472 aaKnown RBP28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 MAPK4P31152 587 aa28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 MNX1P50219 401 aaPredicted RBP28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 SLFNL1Q499Z3 407 aa28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 MAP3K21Q5TCX8 1036 aa28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 NUDT12Q9BQG2 462 aa28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 BCL11AQ9H165 835 aa28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 HMX1Q9NP08 348 aaPredicted RBP28.2■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L15C9J2P7 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L13C9JLJ4 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L11C9JVI0 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L18D6R9N7 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L22D6RA61 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L17D6RBQ6 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L19D6RCP7 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L20D6RJB6 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 POLR3DP05423 398 aaPredicted RBP28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 XRCC5P13010 732 aaKnown RBP28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 USP17L24Q0WX57 530 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 GPR142Q7Z601 462 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 LCORLQ8N3X6 602 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 GTF3C2Q8WUA4 911 aaPredicted RBP28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 SDR42E1Q8WUS8 393 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 SOCS4Q8WXH5 440 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 CRNKL1Q9BZJ0 848 aaKnown RBP28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 NR2E3Q9Y5X4 410 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 PLXNB2O15031 1838 aa28.19■■■□□ 2.1
GTPBP3-227ENST00000602056 RAB11FIP3O75154 756 aa28.18■■■□□ 2.1
GTPBP3-227ENST00000602056 CYP2D6P10635 497 aa28.18■■■□□ 2.1
GTPBP3-227ENST00000602056 VCAM1P19320 739 aa28.18■■■□□ 2.1
GTPBP3-227ENST00000602056 MORN1Q5T089 497 aa28.18■■■□□ 2.1
GTPBP3-227ENST00000602056 CATSPERGQ6ZRH7 1159 aa28.18■■■□□ 2.1
GTPBP3-227ENST00000602056 DCP1AQ9NPI6 582 aaPredicted RBP28.18■■■□□ 2.1
GTPBP3-227ENST00000602056 MCM9Q9NXL9 1143 aa28.18■■■□□ 2.1
GTPBP3-227ENST00000602056 SEPT2Q15019 361 aa28.17■■■□□ 2.1
GTPBP3-227ENST00000602056 BOLA2Q9H3K6 86 aa28.17■■■□□ 2.1
GTPBP3-227ENST00000602056 CABP5Q9NP86 173 aa28.17■■■□□ 2.1
GTPBP3-227ENST00000602056 RABGAP1Q9Y3P9 1069 aa28.17■■■□□ 2.1
GTPBP3-227ENST00000602056 MYH1P12882 1939 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 DDX60LQ5H9U9 1706 aaKnown RBP28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 EVI5O60447 810 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 CHGBP05060 677 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 PRKAR2AP13861 404 aaKnown RBP28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 USP14P54578 494 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 CCL14Q16627 93 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 C20orf194Q5TEA3 1177 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 NECAB2Q7Z6G3 386 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 PLEKHH3Q7Z736 793 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 RCAN3Q9UKA8 241 aa28.16■■■□□ 2.1
GTPBP3-227ENST00000602056 A0A1W2PRG0 241 aa28.15■■■□□ 2.1
GTPBP3-227ENST00000602056 PDE3AQ14432 1141 aa28.15■■■□□ 2.1
GTPBP3-227ENST00000602056 ANKLE1Q8NAG6 615 aa28.15■■■□□ 2.1
GTPBP3-227ENST00000602056 SLC44A5Q8NCS7 719 aa28.15■■■□□ 2.1
GTPBP3-227ENST00000602056 ARMT1Q9H993 441 aa28.15■■■□□ 2.1
GTPBP3-227ENST00000602056 PRKAB2O43741 272 aa28.14■■■□□ 2.1
GTPBP3-227ENST00000602056 ATP5JP18859 108 aa28.14■■■□□ 2.1
GTPBP3-227ENST00000602056 CACNB2Q08289 660 aaPredicted RBP28.14■■■□□ 2.1
GTPBP3-227ENST00000602056 PAG1Q9NWQ8 432 aa28.14■■■□□ 2.1
GTPBP3-227ENST00000602056 BTBD7Q9P203 1132 aa28.14■■■□□ 2.1
GTPBP3-227ENST00000602056 OGDHLQ9ULD0 1010 aa28.14■■■□□ 2.1
GTPBP3-227ENST00000602056 RANBP2P49792 3224 aaKnown RBP28.13■■■□□ 2.09
GTPBP3-227ENST00000602056 SMIM22K7EJ46 135 aa28.13■■■□□ 2.09
GTPBP3-227ENST00000602056 ZKSCAN1P17029 563 aaPredicted RBP28.13■■■□□ 2.09
GTPBP3-227ENST00000602056 ADD2P35612 726 aa28.13■■■□□ 2.09
GTPBP3-227ENST00000602056 LBX2Q6XYB7 198 aa28.13■■■□□ 2.09
GTPBP3-227ENST00000602056 CCAR1Q8IX12 1150 aaKnown RBP28.13■■■□□ 2.09
GTPBP3-227ENST00000602056 RPAP3Q9H6T3 665 aaPredicted RBP28.13■■■□□ 2.09
GTPBP3-227ENST00000602056 SPDYE16A6NNV3 312 aaPredicted RBP28.12■■■□□ 2.09
GTPBP3-227ENST00000602056 RGS2P41220 211 aa28.12■■■□□ 2.09
GTPBP3-227ENST00000602056 DYNLL2Q96FJ2 89 aa28.12■■■□□ 2.09
GTPBP3-227ENST00000602056 HAUS7Q99871 368 aa28.12■■■□□ 2.09
GTPBP3-227ENST00000602056 MBD4O95243 580 aa28.11■■■□□ 2.09
GTPBP3-227ENST00000602056 KIAA1755Q5JYT7 1200 aa28.11■■■□□ 2.09
GTPBP3-227ENST00000602056 TRMT44Q8IYL2 757 aaKnown RBP28.11■■■□□ 2.09
GTPBP3-227ENST00000602056 APBA2Q99767 749 aa28.11■■■□□ 2.09
GTPBP3-227ENST00000602056 MPHOSPH10O00566 681 aaKnown RBP28.1■■■□□ 2.09
GTPBP3-227ENST00000602056 CCND3P30281 292 aaPredicted RBP28.1■■■□□ 2.09
GTPBP3-227ENST00000602056 MAP2K5Q13163 448 aa28.1■■■□□ 2.09
GTPBP3-227ENST00000602056 SIAH1Q8IUQ4 282 aa28.1■■■□□ 2.09
GTPBP3-227ENST00000602056 NBPF3Q9H094 633 aa28.1■■■□□ 2.09
GTPBP3-227ENST00000602056 LHX8Q68G74 356 aa28.09■■■□□ 2.09
GTPBP3-227ENST00000602056 FLRT1Q9NZU1 646 aa28.09■■■□□ 2.09
GTPBP3-227ENST00000602056 SMARCA5O60264 1052 aaPredicted RBP28.08■■■□□ 2.09
GTPBP3-227ENST00000602056 CCNA1P78396 465 aa28.08■■■□□ 2.09
GTPBP3-227ENST00000602056 CLEC10AQ8IUN9 316 aa28.08■■■□□ 2.09
GTPBP3-227ENST00000602056 CHMP4BQ9H444 224 aaKnown RBP28.08■■■□□ 2.09
GTPBP3-227ENST00000602056 C11orf49Q9H6J7 331 aa28.08■■■□□ 2.09
GTPBP3-227ENST00000602056 STAP2Q9UGK3 403 aa28.08■■■□□ 2.09
GTPBP3-227ENST00000602056 CYP2D7A0A087X1C5 515 aa28.07■■■□□ 2.08
GTPBP3-227ENST00000602056 SLC15A5A6NIM6 579 aa28.07■■■□□ 2.08
GTPBP3-227ENST00000602056 AKR1B1P15121 316 aa28.07■■■□□ 2.08
GTPBP3-227ENST00000602056 PTPREP23469 700 aa28.07■■■□□ 2.08
GTPBP3-227ENST00000602056 C7orf61Q8IZ16 206 aa28.07■■■□□ 2.08
GTPBP3-227ENST00000602056 WDR78Q5VTH9 848 aa28.06■■■□□ 2.08
GTPBP3-227ENST00000602056 TMEM179Q6ZVK1 233 aa28.06■■■□□ 2.08
GTPBP3-227ENST00000602056 CWC22Q9HCG8 908 aaKnown RBP28.06■■■□□ 2.08
GTPBP3-227ENST00000602056 ATP8A2Q9NTI2 1148 aa28.06■■■□□ 2.08
GTPBP3-227ENST00000602056 SWAP70Q9UH65 585 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms