RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 SNRKQ9NRH2 765 aa19.72■□□□□ 0.75
SSBP4-211ENST00000601614 GINM1Q9NU53 330 aa19.72■□□□□ 0.75
SSBP4-211ENST00000601614 ATP11BQ9Y2G3 1177 aa19.72■□□□□ 0.75
SSBP4-211ENST00000601614 ZNF236Q9UL36 1845 aa19.72■□□□□ 0.75
SSBP4-211ENST00000601614 SMCHD1A6NHR9 2005 aa19.71■□□□□ 0.75
SSBP4-211ENST00000601614 SLC15A5A6NIM6 579 aa19.71■□□□□ 0.75
SSBP4-211ENST00000601614 GH2P01242 217 aa19.71■□□□□ 0.75
SSBP4-211ENST00000601614 HOXC6P09630 235 aa19.71■□□□□ 0.75
SSBP4-211ENST00000601614 CYBAP13498 195 aa19.71■□□□□ 0.75
SSBP4-211ENST00000601614 GRB14Q14449 540 aa19.71■□□□□ 0.75
SSBP4-211ENST00000601614 WDR78Q5VTH9 848 aa19.71■□□□□ 0.75
SSBP4-211ENST00000601614 NOL10Q9BSC4 688 aaKnown RBP19.71■□□□□ 0.75
SSBP4-211ENST00000601614 PRKAG2Q9UGJ0 569 aa19.71■□□□□ 0.75
SSBP4-211ENST00000601614 MSCO60682 206 aa19.7■□□□□ 0.74
SSBP4-211ENST00000601614 BAG3O95817 575 aa19.7■□□□□ 0.74
SSBP4-211ENST00000601614 ANO1Q5XXA6 986 aa19.7■□□□□ 0.74
SSBP4-211ENST00000601614 CATSPERGQ6ZRH7 1159 aa19.7■□□□□ 0.74
SSBP4-211ENST00000601614 SH3RF1Q7Z6J0 888 aa19.7■□□□□ 0.74
SSBP4-211ENST00000601614 BADQ92934 168 aa19.7■□□□□ 0.74
SSBP4-211ENST00000601614 HDAC5Q9UQL6 1122 aa19.7■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L15C9J2P7 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L13C9JLJ4 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L11C9JVI0 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L18D6R9N7 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L22D6RA61 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L17D6RBQ6 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L19D6RCP7 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L20D6RJB6 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 PLCG2P16885 1265 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 DYNLL1P63167 89 aaKnown RBP19.69■□□□□ 0.74
SSBP4-211ENST00000601614 CCNA1P78396 465 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 ATP2B2Q01814 1243 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 USP17L24Q0WX57 530 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 SLC39A5Q6ZMH5 540 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 TRIM34Q9BYJ4 488 aa19.69■□□□□ 0.74
SSBP4-211ENST00000601614 PRDM5Q9NQX1 630 aaPredicted RBP19.69■□□□□ 0.74
SSBP4-211ENST00000601614 ZNFX1Q9P2E3 1918 aaKnown RBP19.68■□□□□ 0.74
SSBP4-211ENST00000601614 A0A0G2JMZ2 1700 aa19.68■□□□□ 0.74
SSBP4-211ENST00000601614 GLRX3O76003 335 aaKnown RBP19.68■□□□□ 0.74
SSBP4-211ENST00000601614 CYP2E1P05181 493 aaPredicted RBP19.68■□□□□ 0.74
SSBP4-211ENST00000601614 UQCRFS1P1P0C7P4 283 aa19.68■□□□□ 0.74
SSBP4-211ENST00000601614 VCAM1P19320 739 aa19.68■□□□□ 0.74
SSBP4-211ENST00000601614 SMAD3P84022 425 aaKnown RBP19.68■□□□□ 0.74
SSBP4-211ENST00000601614 SNX17Q15036 470 aa19.68■□□□□ 0.74
SSBP4-211ENST00000601614 TRIM60Q495X7 471 aa19.68■□□□□ 0.74
SSBP4-211ENST00000601614 LBX2Q6XYB7 198 aa19.68■□□□□ 0.74
SSBP4-211ENST00000601614 ACER1Q8TDN7 264 aa19.68■□□□□ 0.74
SSBP4-211ENST00000601614 API5Q9BZZ5 524 aaKnown RBP19.68■□□□□ 0.74
SSBP4-211ENST00000601614 PDLIM7Q9NR12 457 aa19.68■□□□□ 0.74
SSBP4-211ENST00000601614 PNMA6EA0A0J9YXQ4 647 aa19.67■□□□□ 0.74
SSBP4-211ENST00000601614 TRIM43BA6NCK2 446 aa19.67■□□□□ 0.74
SSBP4-211ENST00000601614 SPDYE16A6NNV3 312 aaPredicted RBP19.67■□□□□ 0.74
SSBP4-211ENST00000601614 TRIM43Q96BQ3 446 aaPredicted RBP19.67■□□□□ 0.74
SSBP4-211ENST00000601614 FEZ1Q99689 392 aa19.67■□□□□ 0.74
SSBP4-211ENST00000601614 MUC3AQ02505 3323 aa19.66■□□□□ 0.74
SSBP4-211ENST00000601614 FOSL2P15408 326 aa19.66■□□□□ 0.74
SSBP4-211ENST00000601614 ITGB8P26012 769 aa19.66■□□□□ 0.74
SSBP4-211ENST00000601614 TATDN1Q6P1N9 297 aa19.66■□□□□ 0.74
SSBP4-211ENST00000601614 TRMT2AQ8IZ69 625 aaKnown RBP19.66■□□□□ 0.74
SSBP4-211ENST00000601614 KIAA1683Q9H0B3 1180 aa19.66■□□□□ 0.74
SSBP4-211ENST00000601614 IVNS1ABPQ9Y6Y0 642 aa19.66■□□□□ 0.74
SSBP4-211ENST00000601614 HLA-DOAP06340 250 aa19.65■□□□□ 0.74
SSBP4-211ENST00000601614 USP38Q8NB14 1042 aa19.65■□□□□ 0.74
SSBP4-211ENST00000601614 DBNDD2Q9BQY9 259 aa19.65■□□□□ 0.74
SSBP4-211ENST00000601614 PIH1D3Q9NQM4 214 aaKnown RBP19.65■□□□□ 0.74
SSBP4-211ENST00000601614 PARP14Q460N5 1801 aa19.65■□□□□ 0.74
SSBP4-211ENST00000601614 GNAI3P08754 354 aa19.64■□□□□ 0.73
SSBP4-211ENST00000601614 EPHB4P54760 987 aa19.64■□□□□ 0.73
SSBP4-211ENST00000601614 RAB3GAP1Q15042 981 aa19.64■□□□□ 0.73
SSBP4-211ENST00000601614 ARRDC4Q8NCT1 418 aa19.64■□□□□ 0.73
SSBP4-211ENST00000601614 FERMT2Q96AC1 680 aa19.64■□□□□ 0.73
SSBP4-211ENST00000601614 RPAP3Q9H6T3 665 aaPredicted RBP19.64■□□□□ 0.73
SSBP4-211ENST00000601614 KBTBD13C9JR72 458 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 COBLO75128 1261 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 ADORA2AP29274 412 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 GUCY1A2P33402 732 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 ADCYAP1R1P41586 468 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 ZAP70P43403 619 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 USP14P54578 494 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 TTC39AQ5SRH9 613 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 PRAMEF19Q5SWL8 479 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 OLFML2BQ68BL8 750 aa19.63■□□□□ 0.73
SSBP4-211ENST00000601614 MOV10L1Q9BXT6 1211 aaKnown RBP19.63■□□□□ 0.73
SSBP4-211ENST00000601614 MYO9BQ13459 2157 aa19.62■□□□□ 0.73
SSBP4-211ENST00000601614 SEPT4O43236 478 aa19.62■□□□□ 0.73
SSBP4-211ENST00000601614 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-211ENST00000601614 G3BP1Q13283 466 aaKnown RBP eCLIP19.62■□□□□ 0.73
SSBP4-211ENST00000601614 LRRC41Q15345 812 aa19.62■□□□□ 0.73
SSBP4-211ENST00000601614 DPP9Q86TI2 863 aa19.62■□□□□ 0.73
SSBP4-211ENST00000601614 MIGA1Q8NAN2 632 aa19.62■□□□□ 0.73
SSBP4-211ENST00000601614 TNNQ9UQP3 1299 aa19.62■□□□□ 0.73
SSBP4-211ENST00000601614 NAV1Q8NEY1 1877 aa19.62■□□□□ 0.73
SSBP4-211ENST00000601614 COL11A1P12107 1806 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-211ENST00000601614 PLXNA1Q9UIW2 1896 aa19.61■□□□□ 0.73
SSBP4-211ENST00000601614 CYP7A1P22680 504 aa19.61■□□□□ 0.73
SSBP4-211ENST00000601614 SHMT1P34896 483 aa19.61■□□□□ 0.73
SSBP4-211ENST00000601614 TLE2Q04725 743 aa19.61■□□□□ 0.73
SSBP4-211ENST00000601614 ABCB5Q2M3G0 1257 aa19.61■□□□□ 0.73
SSBP4-211ENST00000601614 TNNI3KQ59H18 835 aa19.61■□□□□ 0.73
SSBP4-211ENST00000601614 FAM47AQ5JRC9 791 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms