RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 IDEP14735 1019 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 GUCY1A3Q02108 690 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 SF3A3Q12874 501 aaKnown RBP eCLIP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 IFT88Q13099 833 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 PI16Q6UXB8 463 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 TRAPPC11Q7Z392 1133 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 MB21D2Q8IYB1 491 aaPredicted RBP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 EPSTI1Q96J88 318 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 CSRNP2Q9H175 543 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 DDX21Q9NR30 783 aaKnown RBP eCLIP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 ODF2LQ9ULJ1 636 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 A2ML1A8K2U0 1454 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 SHOX2O60902 331 aaPredicted RBP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 NDUFA10O95299 355 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 GPTP24298 496 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 SEC24CP53992 1094 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 APBA1Q02410 837 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 UBXN1Q04323 297 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 SAFBQ15424 915 aaKnown RBP eCLIP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 CCDC70Q6NSX1 233 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 APTXQ7Z2E3 356 aaKnown RBP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 DIS3L2Q8IYB7 885 aaKnown RBP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 PRPF38AQ8NAV1 312 aaKnown RBP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 ZKSCAN4Q969J2 545 aaPredicted RBP18.12■□□□□ 0.49
SYDE1-204ENST00000600440 DUSP10Q9Y6W6 482 aa18.12■□□□□ 0.49
SYDE1-204ENST00000600440 KRT14P02533 472 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 PAX7P23759 505 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 CXCR5P32302 372 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 ELF1P32519 619 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 KRT31Q15323 416 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 GUCY1A2P33402 732 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
SYDE1-204ENST00000600440 CDR1P51861 262 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 NEDD9Q14511 834 aa18.11■□□□□ 0.49
SYDE1-204ENST00000600440 TSR1Q2NL82 804 aaKnown RBP18.11■□□□□ 0.49
SYDE1-204ENST00000600440 DMGDHQ9UI17 866 aaKnown RBP18.11■□□□□ 0.49
SYDE1-204ENST00000600440 KIF1CO43896 1103 aaKnown RBP18.1■□□□□ 0.49
SYDE1-204ENST00000600440 CYP27A1Q02318 531 aa18.1■□□□□ 0.49
SYDE1-204ENST00000600440 LRRC24Q50LG9 513 aa18.1■□□□□ 0.49
SYDE1-204ENST00000600440 EHD2Q9NZN4 543 aa18.1■□□□□ 0.49
SYDE1-204ENST00000600440 REXO2Q9Y3B8 237 aaKnown RBP18.1■□□□□ 0.49
SYDE1-204ENST00000600440 RPSAP08865 295 aaKnown RBP18.1■□□□□ 0.49
SYDE1-204ENST00000600440 RRAGBQ5VZM2 374 aa18.1■□□□□ 0.49
SYDE1-204ENST00000600440 PUS7LQ9H0K6 701 aaKnown RBP18.1■□□□□ 0.49
SYDE1-204ENST00000600440 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 ZBTB43O43298 467 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 CDKL5O76039 1030 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 RRP12Q5JTH9 1297 aaKnown RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 CEP85LQ5SZL2 805 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 LRCH2Q5VUJ6 765 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 NOSTRINQ8IVI9 506 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 SMCR8Q8TEV9 937 aaPredicted RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 CTAGE1Q96RT6 745 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 LRRC1Q9BTT6 524 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 ANGEL1Q9UNK9 670 aaKnown RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 CEMIPQ8WUJ3 1361 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 MEFVO15553 781 aaPredicted RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 B4GALNT4Q76KP1 1039 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 CYB5R4Q7L1T6 521 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 PCMTD1Q96MG8 357 aaPredicted RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 ESF1Q9H501 851 aaKnown RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 VEZTQ9HBM0 779 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 AKAP12Q02952 1782 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 RANBP6O60518 1105 aaKnown RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 SKAP2O75563 359 aaPredicted RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 TOB1P50616 345 aaPredicted RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 DPYDQ12882 1025 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 SF3B2Q13435 895 aaKnown RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 ANKRD13DQ6ZTN6 518 aa18.09■□□□□ 0.49
SYDE1-204ENST00000600440 TSEN2Q8NCE0 465 aaKnown RBP18.09■□□□□ 0.49
SYDE1-204ENST00000600440 BACH1O14867 736 aa18.08■□□□□ 0.49
SYDE1-204ENST00000600440 HSF2BPO75031 334 aa18.08■□□□□ 0.49
SYDE1-204ENST00000600440 ERCC5P28715 1186 aaPredicted RBP18.08■□□□□ 0.49
SYDE1-204ENST00000600440 HPDP32754 393 aaPredicted RBP18.08■□□□□ 0.49
SYDE1-204ENST00000600440 CKAP4Q07065 602 aaKnown RBP18.08■□□□□ 0.49
SYDE1-204ENST00000600440 TTMPQ5BVD1 217 aa18.08■□□□□ 0.49
SYDE1-204ENST00000600440 LMOD2Q6P5Q4 547 aa18.08■□□□□ 0.49
SYDE1-204ENST00000600440 APOA5Q6Q788 366 aa18.08■□□□□ 0.49
SYDE1-204ENST00000600440 FBXO2Q9UK22 296 aaPredicted RBP18.08■□□□□ 0.49
SYDE1-204ENST00000600440 FAM184BQ9ULE4 1060 aa18.08■□□□□ 0.49
SYDE1-204ENST00000600440 ZPR1O75312 459 aa18.08■□□□□ 0.48
SYDE1-204ENST00000600440 PDHBP11177 359 aa18.08■□□□□ 0.48
SYDE1-204ENST00000600440 SARSP49591 514 aaKnown RBP18.08■□□□□ 0.48
SYDE1-204ENST00000600440 ZKSCAN3Q9BRR0 538 aa18.08■□□□□ 0.48
SYDE1-204ENST00000600440 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.08■□□□□ 0.48
SYDE1-204ENST00000600440 KLC4Q9NSK0 619 aa18.08■□□□□ 0.48
SYDE1-204ENST00000600440 UBN2Q6ZU65 1347 aa18.07■□□□□ 0.48
SYDE1-204ENST00000600440 CHUKO15111 745 aa18.07■□□□□ 0.48
SYDE1-204ENST00000600440 ACTN4O43707 911 aaKnown RBP18.07■□□□□ 0.48
SYDE1-204ENST00000600440 IPO7O95373 1038 aaKnown RBP18.07■□□□□ 0.48
SYDE1-204ENST00000600440 BRD2P25440 801 aaKnown RBP18.07■□□□□ 0.48
SYDE1-204ENST00000600440 AKAP4Q5JQC9 854 aa18.07■□□□□ 0.48
SYDE1-204ENST00000600440 CCDC114Q96M63 670 aa18.07■□□□□ 0.48
SYDE1-204ENST00000600440 LACRTQ9GZZ8 138 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms