RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 USP17L15C9J2P7 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 USP17L13C9JLJ4 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 USP17L11C9JVI0 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 USP17L18D6R9N7 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 USP17L22D6RA61 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 USP17L17D6RBQ6 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 USP17L19D6RCP7 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 USP17L20D6RJB6 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 MNX1P50219 401 aaPredicted RBP22.88■■□□□ 1.25
FARP1-229ENST00000600190 USP17L24Q0WX57 530 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 ABCB5Q2M3G0 1257 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 PLEKHH3Q7Z736 793 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 TRMT44Q8IYL2 757 aaKnown RBP22.88■■□□□ 1.25
FARP1-229ENST00000600190 IL1RAPL2Q9NP60 686 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 OGDHLQ9ULD0 1010 aa22.88■■□□□ 1.25
FARP1-229ENST00000600190 A0A1W2PPC1 479 aa22.87■■□□□ 1.25
FARP1-229ENST00000600190 RGS2P41220 211 aa22.87■■□□□ 1.25
FARP1-229ENST00000600190 USP14P54578 494 aa22.87■■□□□ 1.25
FARP1-229ENST00000600190 CACNB2Q08289 660 aaPredicted RBP22.87■■□□□ 1.25
FARP1-229ENST00000600190 CCL14Q16627 93 aa22.87■■□□□ 1.25
FARP1-229ENST00000600190 USP6NLQ92738 828 aa22.87■■□□□ 1.25
FARP1-229ENST00000600190 C12orf42Q96LP6 360 aa22.87■■□□□ 1.25
FARP1-229ENST00000600190 CABP5Q9NP86 173 aa22.87■■□□□ 1.25
FARP1-229ENST00000600190 ZMYND8Q9ULU4 1186 aaPredicted RBP22.87■■□□□ 1.25
FARP1-229ENST00000600190 DDX60LQ5H9U9 1706 aaKnown RBP22.86■■□□□ 1.25
FARP1-229ENST00000600190 MAGEB6P1A0A0J9YX57 407 aa22.86■■□□□ 1.25
FARP1-229ENST00000600190 POLR3DP05423 398 aaPredicted RBP22.86■■□□□ 1.25
FARP1-229ENST00000600190 PLCD1P51178 756 aa22.86■■□□□ 1.25
FARP1-229ENST00000600190 MORN1Q5T089 497 aa22.86■■□□□ 1.25
FARP1-229ENST00000600190 TMED8Q6PL24 325 aaPredicted RBP22.86■■□□□ 1.25
FARP1-229ENST00000600190 RPAP2Q8IXW5 612 aaPredicted RBP22.86■■□□□ 1.25
FARP1-229ENST00000600190 ACER1Q8TDN7 264 aa22.86■■□□□ 1.25
FARP1-229ENST00000600190 BCL11AQ9H165 835 aa22.86■■□□□ 1.25
FARP1-229ENST00000600190 RABGAP1Q9Y3P9 1069 aa22.86■■□□□ 1.25
FARP1-229ENST00000600190 HMMRO75330 724 aa22.85■■□□□ 1.25
FARP1-229ENST00000600190 CCNA1P78396 465 aa22.85■■□□□ 1.25
FARP1-229ENST00000600190 C20orf194Q5TEA3 1177 aa22.85■■□□□ 1.25
FARP1-229ENST00000600190 WDR78Q5VTH9 848 aa22.85■■□□□ 1.25
FARP1-229ENST00000600190 CATSPERGQ6ZRH7 1159 aa22.85■■□□□ 1.25
FARP1-229ENST00000600190 RIOK1Q9BRS2 568 aaKnown RBP22.85■■□□□ 1.25
FARP1-229ENST00000600190 KIAA1683Q9H0B3 1180 aa22.85■■□□□ 1.25
FARP1-229ENST00000600190 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
FARP1-229ENST00000600190 APBB1O00213 710 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 SOX1O00570 391 aaPredicted RBP22.84■■□□□ 1.25
FARP1-229ENST00000600190 CNMDO75829 334 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 SYN1P17600 705 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 VCAM1P19320 739 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 CCND3P30281 292 aaPredicted RBP22.84■■□□□ 1.25
FARP1-229ENST00000600190 SHMT1P34896 483 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 TTF1Q15361 905 aaPredicted RBP22.84■■□□□ 1.25
FARP1-229ENST00000600190 HSP90AB4PQ58FF6 505 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 SLC9C2Q5TAH2 1124 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 RHPN1Q8TCX5 695 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 APBA2Q99767 749 aa22.84■■□□□ 1.25
FARP1-229ENST00000600190 GLRX3O76003 335 aaKnown RBP22.83■■□□□ 1.25
FARP1-229ENST00000600190 EDC3Q96F86 508 aaKnown RBP22.83■■□□□ 1.25
FARP1-229ENST00000600190 ZBTB40Q9NUA8 1239 aa22.83■■□□□ 1.25
FARP1-229ENST00000600190 DNAH12Q6ZR08 3092 aa22.83■■□□□ 1.24
FARP1-229ENST00000600190 MAP2K5Q13163 448 aa22.82■■□□□ 1.24
FARP1-229ENST00000600190 LRCH3Q96II8 777 aa22.82■■□□□ 1.24
FARP1-229ENST00000600190 GDF15Q99988 308 aa22.82■■□□□ 1.24
FARP1-229ENST00000600190 CRNKL1Q9BZJ0 848 aaKnown RBP22.82■■□□□ 1.24
FARP1-229ENST00000600190 RPAP3Q9H6T3 665 aaPredicted RBP22.82■■□□□ 1.24
FARP1-229ENST00000600190 MCM9Q9NXL9 1143 aa22.82■■□□□ 1.24
FARP1-229ENST00000600190 MPHOSPH10O00566 681 aaKnown RBP22.81■■□□□ 1.24
FARP1-229ENST00000600190 PDE6AP16499 860 aa22.81■■□□□ 1.24
FARP1-229ENST00000600190 BMP8BP34820 402 aa22.81■■□□□ 1.24
FARP1-229ENST00000600190 SEPT2Q15019 361 aa22.81■■□□□ 1.24
FARP1-229ENST00000600190 LHX8Q68G74 356 aa22.81■■□□□ 1.24
FARP1-229ENST00000600190 CLASRPQ8N2M8 674 aaKnown RBP22.81■■□□□ 1.24
FARP1-229ENST00000600190 DNAJC2Q99543 621 aaKnown RBP22.81■■□□□ 1.24
FARP1-229ENST00000600190 PFASO15067 1338 aa22.81■■□□□ 1.24
FARP1-229ENST00000600190 ZNF532Q9HCE3 1301 aa22.81■■□□□ 1.24
FARP1-229ENST00000600190 GOLIM4O00461 696 aa22.8■■□□□ 1.24
FARP1-229ENST00000600190 GUCY1A2P33402 732 aa22.8■■□□□ 1.24
FARP1-229ENST00000600190 EVX2Q03828 476 aa22.8■■□□□ 1.24
FARP1-229ENST00000600190 BTBD7Q9P203 1132 aa22.8■■□□□ 1.24
FARP1-229ENST00000600190 IVNS1ABPQ9Y6Y0 642 aa22.8■■□□□ 1.24
FARP1-229ENST00000600190 COL6A3P12111 3177 aa22.8■■□□□ 1.24
FARP1-229ENST00000600190 IFIT2P09913 472 aaKnown RBP22.79■■□□□ 1.24
FARP1-229ENST00000600190 PTPREP23469 700 aa22.79■■□□□ 1.24
FARP1-229ENST00000600190 MFSD14CQ5VZR4 134 aa22.79■■□□□ 1.24
FARP1-229ENST00000600190 SDR42E1Q8WUS8 393 aa22.79■■□□□ 1.24
FARP1-229ENST00000600190 KIF1BPQ96EK5 621 aa22.79■■□□□ 1.24
FARP1-229ENST00000600190 FLRT1Q9NZU1 646 aa22.79■■□□□ 1.24
FARP1-229ENST00000600190 NAV1Q8NEY1 1877 aa22.79■■□□□ 1.24
FARP1-229ENST00000600190 SLC15A5A6NIM6 579 aa22.78■■□□□ 1.24
FARP1-229ENST00000600190 SPDYE16A6NNV3 312 aaPredicted RBP22.78■■□□□ 1.24
FARP1-229ENST00000600190 MAGEA10P43363 369 aaPredicted RBP22.78■■□□□ 1.24
FARP1-229ENST00000600190 GABPAQ06546 454 aa22.78■■□□□ 1.24
FARP1-229ENST00000600190 AAMPQ13685 434 aa22.78■■□□□ 1.24
FARP1-229ENST00000600190 LBX2Q6XYB7 198 aa22.78■■□□□ 1.24
FARP1-229ENST00000600190 COL6A1P12109 1028 aa22.77■■□□□ 1.24
FARP1-229ENST00000600190 ATP2B2Q01814 1243 aa22.77■■□□□ 1.24
FARP1-229ENST00000600190 LCORLQ8N3X6 602 aa22.77■■□□□ 1.24
FARP1-229ENST00000600190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.77■■□□□ 1.24
FARP1-229ENST00000600190 DCP1AQ9NPI6 582 aaPredicted RBP22.77■■□□□ 1.24
FARP1-229ENST00000600190 A0A1W2PRG0 241 aa22.76■■□□□ 1.23
FARP1-229ENST00000600190 TCRBV5S4A2TA0A5A2 114 aa22.76■■□□□ 1.23
FARP1-229ENST00000600190 CYP2D6P10635 497 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms