RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 CDK5RAP2Q96SN8 1893 aa20.93■□□□□ 0.94
SMG9-210ENST00000600097 GLRX3O76003 335 aaKnown RBP20.93■□□□□ 0.94
SMG9-210ENST00000600097 KIAA1683Q9H0B3 1180 aa20.93■□□□□ 0.94
SMG9-210ENST00000600097 CERKLQ49MI3 558 aaPredicted RBP20.92■□□□□ 0.94
SMG9-210ENST00000600097 GPR153Q6NV75 609 aa20.92■□□□□ 0.94
SMG9-210ENST00000600097 POTEEQ6S8J3 1075 aa20.92■□□□□ 0.94
SMG9-210ENST00000600097 ERC1Q8IUD2 1116 aa20.92■□□□□ 0.94
SMG9-210ENST00000600097 LRCH3Q96II8 777 aa20.92■□□□□ 0.94
SMG9-210ENST00000600097 CABP5Q9NP86 173 aa20.92■□□□□ 0.94
SMG9-210ENST00000600097 ALPK3Q96L96 1907 aa20.92■□□□□ 0.94
SMG9-210ENST00000600097 PFASO15067 1338 aa20.91■□□□□ 0.94
SMG9-210ENST00000600097 MAP2K5Q13163 448 aa20.91■□□□□ 0.94
SMG9-210ENST00000600097 RAB3GAP1Q15042 981 aa20.91■□□□□ 0.94
SMG9-210ENST00000600097 ZYXQ15942 572 aaKnown RBP20.91■□□□□ 0.94
SMG9-210ENST00000600097 ABCB5Q2M3G0 1257 aa20.91■□□□□ 0.94
SMG9-210ENST00000600097 DDX60LQ5H9U9 1706 aaKnown RBP20.9■□□□□ 0.94
SMG9-210ENST00000600097 COL6A1P12109 1028 aa20.9■□□□□ 0.94
SMG9-210ENST00000600097 SYN1P17600 705 aa20.9■□□□□ 0.94
SMG9-210ENST00000600097 CCL14Q16627 93 aa20.9■□□□□ 0.94
SMG9-210ENST00000600097 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
SMG9-210ENST00000600097 LHX8Q68G74 356 aa20.9■□□□□ 0.94
SMG9-210ENST00000600097 LBX2Q6XYB7 198 aa20.9■□□□□ 0.94
SMG9-210ENST00000600097 CATSPERGQ6ZRH7 1159 aa20.9■□□□□ 0.94
SMG9-210ENST00000600097 EDC3Q96F86 508 aaKnown RBP20.9■□□□□ 0.94
SMG9-210ENST00000600097 ANTXR1Q9H6X2 564 aa20.9■□□□□ 0.94
SMG9-210ENST00000600097 RLBP1P12271 317 aa20.89■□□□□ 0.93
SMG9-210ENST00000600097 VCAM1P19320 739 aa20.89■□□□□ 0.93
SMG9-210ENST00000600097 CCND3P30281 292 aaPredicted RBP20.89■□□□□ 0.93
SMG9-210ENST00000600097 MAGEA10P43363 369 aaPredicted RBP20.89■□□□□ 0.93
SMG9-210ENST00000600097 MFSD14CQ5VZR4 134 aa20.89■□□□□ 0.93
SMG9-210ENST00000600097 CEP85Q6P2H3 762 aa20.89■□□□□ 0.93
SMG9-210ENST00000600097 AACSQ86V21 672 aa20.89■□□□□ 0.93
SMG9-210ENST00000600097 NDUFB9Q9Y6M9 179 aa20.89■□□□□ 0.93
SMG9-210ENST00000600097 MYO5AQ9Y4I1 1855 aaKnown RBP20.89■□□□□ 0.93
SMG9-210ENST00000600097 SLC15A5A6NIM6 579 aa20.88■□□□□ 0.93
SMG9-210ENST00000600097 CNMDO75829 334 aa20.88■□□□□ 0.93
SMG9-210ENST00000600097 TTF1Q15361 905 aaPredicted RBP20.88■□□□□ 0.93
SMG9-210ENST00000600097 LRIT3Q3SXY7 679 aa20.88■□□□□ 0.93
SMG9-210ENST00000600097 HSP90AB4PQ58FF6 505 aa20.88■□□□□ 0.93
SMG9-210ENST00000600097 TDHQ8IZJ6 230 aa20.88■□□□□ 0.93
SMG9-210ENST00000600097 SLC17A8Q8NDX2 589 aa20.88■□□□□ 0.93
SMG9-210ENST00000600097 RIOK1Q9BRS2 568 aaKnown RBP20.88■□□□□ 0.93
SMG9-210ENST00000600097 IVNS1ABPQ9Y6Y0 642 aa20.88■□□□□ 0.93
SMG9-210ENST00000600097 LAMA3Q16787 3333 aa20.88■□□□□ 0.93
SMG9-210ENST00000600097 PTPREP23469 700 aa20.87■□□□□ 0.93
SMG9-210ENST00000600097 SHMT1P34896 483 aa20.87■□□□□ 0.93
SMG9-210ENST00000600097 WDR78Q5VTH9 848 aa20.87■□□□□ 0.93
SMG9-210ENST00000600097 ACER1Q8TDN7 264 aa20.87■□□□□ 0.93
SMG9-210ENST00000600097 EXOC6BQ9Y2D4 811 aa20.87■□□□□ 0.93
SMG9-210ENST00000600097 MYH1P12882 1939 aa20.86■□□□□ 0.93
SMG9-210ENST00000600097 MAGEB6P1A0A0J9YX57 407 aa20.86■□□□□ 0.93
SMG9-210ENST00000600097 MSCO60682 206 aa20.86■□□□□ 0.93
SMG9-210ENST00000600097 POLR3DP05423 398 aaPredicted RBP20.86■□□□□ 0.93
SMG9-210ENST00000600097 HOXC6P09630 235 aa20.86■□□□□ 0.93
SMG9-210ENST00000600097 PLCD1P51178 756 aa20.86■□□□□ 0.93
SMG9-210ENST00000600097 CRNKL1Q9BZJ0 848 aaKnown RBP20.86■□□□□ 0.93
SMG9-210ENST00000600097 UBE2OQ9C0C9 1292 aaKnown RBP20.86■□□□□ 0.93
SMG9-210ENST00000600097 HNRNPUQ00839 825 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMG9-210ENST00000600097 ATP2B2Q01814 1243 aa20.85■□□□□ 0.93
SMG9-210ENST00000600097 RPAP3Q9H6T3 665 aaPredicted RBP20.85■□□□□ 0.93
SMG9-210ENST00000600097 SPDYE16A6NNV3 312 aaPredicted RBP20.84■□□□□ 0.93
SMG9-210ENST00000600097 GABPAQ06546 454 aa20.84■□□□□ 0.93
SMG9-210ENST00000600097 GRB14Q14449 540 aa20.84■□□□□ 0.93
SMG9-210ENST00000600097 LRRC26Q2I0M4 334 aa20.84■□□□□ 0.93
SMG9-210ENST00000600097 SLC9C2Q5TAH2 1124 aa20.84■□□□□ 0.93
SMG9-210ENST00000600097 HOXC10Q9NYD6 342 aa20.84■□□□□ 0.93
SMG9-210ENST00000600097 BTBD7Q9P203 1132 aa20.84■□□□□ 0.93
SMG9-210ENST00000600097 GUCY1A2P33402 732 aa20.83■□□□□ 0.93
SMG9-210ENST00000600097 SEPT2Q15019 361 aa20.83■□□□□ 0.93
SMG9-210ENST00000600097 DEFB123Q8N688 67 aa20.83■□□□□ 0.93
SMG9-210ENST00000600097 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
SMG9-210ENST00000600097 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
SMG9-210ENST00000600097 MCM9Q9NXL9 1143 aa20.83■□□□□ 0.93
SMG9-210ENST00000600097 FLRT1Q9NZU1 646 aa20.83■□□□□ 0.93
SMG9-210ENST00000600097 DDX20Q9UHI6 824 aaKnown RBP20.83■□□□□ 0.93
SMG9-210ENST00000600097 PDE6AP16499 860 aa20.82■□□□□ 0.92
SMG9-210ENST00000600097 COG2Q14746 738 aa20.82■□□□□ 0.92
SMG9-210ENST00000600097 CLASRPQ8N2M8 674 aaKnown RBP20.82■□□□□ 0.92
SMG9-210ENST00000600097 LPAR1Q92633 364 aa20.82■□□□□ 0.92
SMG9-210ENST00000600097 MPHOSPH10O00566 681 aaKnown RBP20.81■□□□□ 0.92
SMG9-210ENST00000600097 STRNO43815 780 aa20.81■□□□□ 0.92
SMG9-210ENST00000600097 CNGA1P29973 690 aa20.81■□□□□ 0.92
SMG9-210ENST00000600097 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMG9-210ENST00000600097 SENP6Q9GZR1 1112 aaPredicted RBP20.81■□□□□ 0.92
SMG9-210ENST00000600097 DPP9Q86TI2 863 aa20.8■□□□□ 0.92
SMG9-210ENST00000600097 NPLOC4Q8TAT6 608 aa20.8■□□□□ 0.92
SMG9-210ENST00000600097 KIF1BPQ96EK5 621 aa20.8■□□□□ 0.92
SMG9-210ENST00000600097 ZNF532Q9HCE3 1301 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 A0A1W2PRG0 241 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 DNM1LO00429 736 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 DLL1O00548 723 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 MS4A1P11836 297 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 CYP2C19P33261 490 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 TMEM179Q6ZVK1 233 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 MB21D1Q8N884 522 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 SHCBP1Q8NEM2 672 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 PANK1Q8TE04 598 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 MOV10L1Q9BXT6 1211 aaKnown RBP20.79■□□□□ 0.92
SMG9-210ENST00000600097 TANGO6Q9C0B7 1094 aa20.79■□□□□ 0.92
SMG9-210ENST00000600097 DCP1AQ9NPI6 582 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms