RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 COA7Q96BR5 231 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 FEZ1Q99689 392 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
SIN3B-210ENST00000599880 SLC4A4Q9Y6R1 1079 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 SALL3Q9BXA9 1300 aa13.13□□□□□ -0.31
SIN3B-210ENST00000599880 CHGBP05060 677 aa13.12□□□□□ -0.31
SIN3B-210ENST00000599880 FLT3LGP49771 235 aa13.12□□□□□ -0.31
SIN3B-210ENST00000599880 UBXN2AP68543 259 aa13.12□□□□□ -0.31
SIN3B-210ENST00000599880 EVX2Q03828 476 aa13.12□□□□□ -0.31
SIN3B-210ENST00000599880 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
SIN3B-210ENST00000599880 TMEM179Q6ZVK1 233 aa13.12□□□□□ -0.31
SIN3B-210ENST00000599880 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
SIN3B-210ENST00000599880 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
SIN3B-210ENST00000599880 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
SIN3B-210ENST00000599880 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L21D6R901 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L17D6RBQ6 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L19D6RCP7 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L20D6RJB6 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 RNF113AO15541 343 aaKnown RBP13.11□□□□□ -0.31
SIN3B-210ENST00000599880 ADCY3O60266 1144 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 CYP2D6P10635 497 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 VCAM1P19320 739 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 EN2P19622 333 aaPredicted RBP13.11□□□□□ -0.31
SIN3B-210ENST00000599880 MX1P20591 662 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 USP17L24Q0WX57 530 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 SEPT2Q15019 361 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 STRBPQ96SI9 672 aaKnown RBP13.11□□□□□ -0.31
SIN3B-210ENST00000599880 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
SIN3B-210ENST00000599880 MYH4Q9Y623 1939 aa13.11□□□□□ -0.31
SIN3B-210ENST00000599880 MPHOSPH10O00566 681 aaKnown RBP13.1□□□□□ -0.31
SIN3B-210ENST00000599880 CAPN2P17655 700 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 GNAT2P19087 354 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 CDK8P49336 464 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 ERVK-9P63128 1117 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 ERVK-24P63145 666 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 MTFR1Q15390 333 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 SBK1Q52WX2 424 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 PRPF38BQ5VTL8 546 aaKnown RBP13.1□□□□□ -0.31
SIN3B-210ENST00000599880 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 CATSPERGQ6ZRH7 1159 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 GPRC5AQ8NFJ5 357 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 OSBP2Q969R2 916 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 DYNLL2Q96FJ2 89 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 SH2D4AQ9H788 454 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 TXNRD2Q9NNW7 524 aa13.1□□□□□ -0.31
SIN3B-210ENST00000599880 ZNF236Q9UL36 1845 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 GSG1L2A8MUP6 293 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 GPAA1O43292 621 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 GJB1P08034 283 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 MAPK4P31152 587 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 ZYXQ15942 572 aaKnown RBP13.09□□□□□ -0.31
SIN3B-210ENST00000599880 OTUD7AQ8TE49 926 aaPredicted RBP13.09□□□□□ -0.31
SIN3B-210ENST00000599880 SOCS4Q8WXH5 440 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 RBPJLQ9UBG7 517 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 RABGAP1Q9Y3P9 1069 aa13.09□□□□□ -0.31
SIN3B-210ENST00000599880 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
SIN3B-210ENST00000599880 CYP2D7A0A087X1C5 515 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 A0A1W2PRG0 241 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 CCL5P13501 91 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 AKR1B1P15121 316 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 GJA8P48165 433 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 ICA1Q05084 483 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 LPAR1Q92633 364 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 FSD1Q9BTV5 496 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
SIN3B-210ENST00000599880 STAP2Q9UGK3 403 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 GJD2Q9UKL4 321 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 TMX2Q9Y320 296 aa13.08□□□□□ -0.32
SIN3B-210ENST00000599880 M0R2C6 588 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
SIN3B-210ENST00000599880 INHAP05111 366 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 XRCC5P13010 732 aaKnown RBP13.07□□□□□ -0.32
SIN3B-210ENST00000599880 ELNP15502 786 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 CCNA1P78396 465 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
SIN3B-210ENST00000599880 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 NUDT12Q9BQG2 462 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 RNF208Q9H0X6 261 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
SIN3B-210ENST00000599880 KANSL2Q9H9L4 492 aa13.07□□□□□ -0.32
SIN3B-210ENST00000599880 FRMPD3Q5JV73 1810 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
SIN3B-210ENST00000599880 SMIM22K7EJ46 135 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms