RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 COL6A1P12109 1028 aa23.43■■□□□ 1.34
IRF3-222ENST00000599144 PLCD1P51178 756 aa23.43■■□□□ 1.34
IRF3-222ENST00000599144 FTSJ3Q8IY81 847 aaKnown RBP23.43■■□□□ 1.34
IRF3-222ENST00000599144 BTBD7Q9P203 1132 aa23.43■■□□□ 1.34
IRF3-222ENST00000599144 SERPINB13Q9UIV8 391 aa23.43■■□□□ 1.34
IRF3-222ENST00000599144 USP17L15C9J2P7 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 USP17L13C9JLJ4 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 USP17L11C9JVI0 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 USP17L18D6R9N7 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 USP17L22D6RA61 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 USP17L17D6RBQ6 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 USP17L19D6RCP7 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 USP17L20D6RJB6 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 VCAM1P19320 739 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 USP17L24Q0WX57 530 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 ABCB5Q2M3G0 1257 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 C12orf42Q96LP6 360 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 UBE2OQ9C0C9 1292 aaKnown RBP23.42■■□□□ 1.34
IRF3-222ENST00000599144 BCL11AQ9H165 835 aa23.42■■□□□ 1.34
IRF3-222ENST00000599144 MYO5AQ9Y4I1 1855 aaKnown RBP23.42■■□□□ 1.34
IRF3-222ENST00000599144 DLL1O00548 723 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 SHMT1P34896 483 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 MDM2Q00987 491 aaPredicted RBP23.41■■□□□ 1.34
IRF3-222ENST00000599144 MAP2K5Q13163 448 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 CERKLQ49MI3 558 aaPredicted RBP23.41■■□□□ 1.34
IRF3-222ENST00000599144 CATSPERGQ6ZRH7 1159 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 AACSQ86V21 672 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 DEFB123Q8N688 67 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 IL1RAPL2Q9NP60 686 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 RABGAP1Q9Y3P9 1069 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 LAMA3Q16787 3333 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 CDK5RAP2Q96SN8 1893 aa23.41■■□□□ 1.34
IRF3-222ENST00000599144 GUCY1A2P33402 732 aa23.4■■□□□ 1.34
IRF3-222ENST00000599144 CEP85Q6P2H3 762 aa23.4■■□□□ 1.34
IRF3-222ENST00000599144 NPLOC4Q8TAT6 608 aa23.4■■□□□ 1.34
IRF3-222ENST00000599144 GTF3C2Q8WUA4 911 aaPredicted RBP23.4■■□□□ 1.34
IRF3-222ENST00000599144 EDC3Q96F86 508 aaKnown RBP23.4■■□□□ 1.34
IRF3-222ENST00000599144 RIOK1Q9BRS2 568 aaKnown RBP23.4■■□□□ 1.34
IRF3-222ENST00000599144 RPAP3Q9H6T3 665 aaPredicted RBP23.4■■□□□ 1.34
IRF3-222ENST00000599144 SEPT2Q15019 361 aa23.39■■□□□ 1.33
IRF3-222ENST00000599144 TRMT44Q8IYL2 757 aaKnown RBP23.39■■□□□ 1.33
IRF3-222ENST00000599144 TDHQ8IZJ6 230 aa23.39■■□□□ 1.33
IRF3-222ENST00000599144 EHD4Q9H223 541 aa23.39■■□□□ 1.33
IRF3-222ENST00000599144 SPDYE16A6NNV3 312 aaPredicted RBP23.38■■□□□ 1.33
IRF3-222ENST00000599144 PTPREP23469 700 aa23.38■■□□□ 1.33
IRF3-222ENST00000599144 CNGA1P29973 690 aa23.38■■□□□ 1.33
IRF3-222ENST00000599144 CYP2C19P33261 490 aa23.38■■□□□ 1.33
IRF3-222ENST00000599144 MAP3K12Q12852 859 aa23.38■■□□□ 1.33
IRF3-222ENST00000599144 TTC6Q86TZ1 520 aa23.38■■□□□ 1.33
IRF3-222ENST00000599144 KIAA1683Q9H0B3 1180 aa23.38■■□□□ 1.33
IRF3-222ENST00000599144 FOCADQ5VW36 1801 aa23.38■■□□□ 1.33
IRF3-222ENST00000599144 APBB1O00213 710 aa23.37■■□□□ 1.33
IRF3-222ENST00000599144 POLR3DP05423 398 aaPredicted RBP23.37■■□□□ 1.33
IRF3-222ENST00000599144 CYP2D6P10635 497 aa23.37■■□□□ 1.33
IRF3-222ENST00000599144 ATN1P54259 1190 aaPredicted RBP23.37■■□□□ 1.33
IRF3-222ENST00000599144 TRPV1Q8NER1 839 aa23.37■■□□□ 1.33
IRF3-222ENST00000599144 PANK1Q8TE04 598 aa23.37■■□□□ 1.33
IRF3-222ENST00000599144 SENP6Q9GZR1 1112 aaPredicted RBP23.37■■□□□ 1.33
IRF3-222ENST00000599144 CABP5Q9NP86 173 aa23.37■■□□□ 1.33
IRF3-222ENST00000599144 MAGEB6P1A0A0J9YX57 407 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 A0A1W2PRG0 241 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 MPHOSPH10O00566 681 aaKnown RBP23.36■■□□□ 1.33
IRF3-222ENST00000599144 USP14P54578 494 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 CCNA1P78396 465 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 HNRNPUQ00839 825 aaKnown RBP eCLIP23.36■■□□□ 1.332e-8■□□□□ 8.3
IRF3-222ENST00000599144 LRIT3Q3SXY7 679 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 SLFNL1Q499Z3 407 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 MFSD14CQ5VZR4 134 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 CLEC10AQ8IUN9 316 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 SLC44A5Q8NCS7 719 aa23.36■■□□□ 1.33
IRF3-222ENST00000599144 SLC15A5A6NIM6 579 aa23.35■■□□□ 1.33
IRF3-222ENST00000599144 ATP2B2Q01814 1243 aa23.35■■□□□ 1.33
IRF3-222ENST00000599144 KIAA1755Q5JYT7 1200 aa23.35■■□□□ 1.33
IRF3-222ENST00000599144 ANO1Q5XXA6 986 aa23.35■■□□□ 1.33
IRF3-222ENST00000599144 SDR42E1Q8WUS8 393 aa23.35■■□□□ 1.33
IRF3-222ENST00000599144 IGSF3O75054 1194 aa23.34■■□□□ 1.33
IRF3-222ENST00000599144 PDE6AP16499 860 aa23.34■■□□□ 1.33
IRF3-222ENST00000599144 DNAJC2Q99543 621 aaKnown RBP23.34■■□□□ 1.33
IRF3-222ENST00000599144 MCM9Q9NXL9 1143 aa23.34■■□□□ 1.33
IRF3-222ENST00000599144 DDX20Q9UHI6 824 aaKnown RBP23.34■■□□□ 1.33
IRF3-222ENST00000599144 SMIM22K7EJ46 135 aa23.33■■□□□ 1.33
IRF3-222ENST00000599144 GLRX3O76003 335 aaKnown RBP23.33■■□□□ 1.33
IRF3-222ENST00000599144 GABPAQ06546 454 aa23.33■■□□□ 1.33
IRF3-222ENST00000599144 GRB14Q14449 540 aa23.33■■□□□ 1.33
IRF3-222ENST00000599144 SLC9C2Q5TAH2 1124 aa23.33■■□□□ 1.33
IRF3-222ENST00000599144 LCORLQ8N3X6 602 aa23.33■■□□□ 1.33
IRF3-222ENST00000599144 DYNLL2Q96FJ2 89 aa23.33■■□□□ 1.33
IRF3-222ENST00000599144 MTMR10Q9NXD2 777 aa23.33■■□□□ 1.33
IRF3-222ENST00000599144 IVNS1ABPQ9Y6Y0 642 aa23.33■■□□□ 1.33
IRF3-222ENST00000599144 ZNF532Q9HCE3 1301 aa23.33■■□□□ 1.32
IRF3-222ENST00000599144 GOLIM4O00461 696 aa23.32■■□□□ 1.32
IRF3-222ENST00000599144 SAMD1Q6SPF0 538 aaPredicted RBP23.32■■□□□ 1.32
IRF3-222ENST00000599144 LBX2Q6XYB7 198 aa23.32■■□□□ 1.32
IRF3-222ENST00000599144 RHPN1Q8TCX5 695 aa23.32■■□□□ 1.32
IRF3-222ENST00000599144 MOV10L1Q9BXT6 1211 aaKnown RBP23.32■■□□□ 1.32
IRF3-222ENST00000599144 CHGBP05060 677 aa23.31■■□□□ 1.32
IRF3-222ENST00000599144 GJC2Q5T442 439 aaPredicted RBP23.31■■□□□ 1.32
IRF3-222ENST00000599144 CERS3Q8IU89 383 aa23.31■■□□□ 1.32
IRF3-222ENST00000599144 CRNKL1Q9BZJ0 848 aaKnown RBP23.31■■□□□ 1.32
IRF3-222ENST00000599144 TANGO6Q9C0B7 1094 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms