RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594		A0A087WZG4	1122 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	MAGEB6P1	A0A0J9YX57	407 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	SMTNL1	A8MU46	457 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	ERC2	O15083	957 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	MBD4	O95243	580 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	MAP3K6	O95382	1288 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	CAPN3	P20807	821 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	CCND1	P24385	295 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	PSMA3	P25788	255 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	UBA7	P41226	1012 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	IREB2	P48200	963 aa	Known RBP	6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	SCNN1D	P51172	638 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	SNX16	P57768	344 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	GRM1	Q13255	1194 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	DGKZ	Q13574	1117 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	C11orf91	Q3C1V1	193 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	ZC3H12B	Q5HYM0	836 aa	Known RBP	6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	KIAA1614	Q5VZ46	1190 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	ZNF787	Q6DD87	383 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	MRM1	Q6IN84	353 aa	Known RBP	6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	IQCE	Q6IPM2	695 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	EPM2AIP1	Q7L775	607 aa	Predicted RBP	6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	SLC9A9	Q8IVB4	645 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	AHI1	Q8N157	1196 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	ZNF713	Q8N859	430 aa	Predicted RBP	6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	SPATA5	Q8NB90	893 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	FLCN	Q8NFG4	579 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	BAP1	Q92560	729 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	TRIM63	Q969Q1	353 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	KIFC2	Q96AC6	838 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	TBC1D31	Q96DN5	1066 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	TRIM44	Q96DX7	344 aa	Predicted RBP	6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	LRGUK	Q96M69	825 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	DHRS4	Q9BTZ2	278 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	ALG13	Q9NP73	1137 aa	Known RBP	6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	ANLN	Q9NQW6	1124 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	EVA1B	Q9NVM1	165 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	TPCN1	Q9ULQ1	816 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	ANKRD6	Q9Y2G4	727 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	ITIH6	Q6UXX5	1313 aa		6.23	□□□□□ -1.41
PAF1-208	ENST00000598594	hCG_1642624	A0A1W2PR95	340 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	TOR1B	O14657	336 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	TLR3	O15455	904 aa	Known RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	SNUPN	O95149	360 aa	Known RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	CCNYL3	P0C7X3	344 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	GTF2E1	P29083	439 aa	Predicted RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	ROR1	Q01973	937 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	PRKG2	Q13237	762 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	G3BP1	Q13283	466 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	CAMK2G	Q13555	558 aa	Predicted RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	GTF2H3	Q13889	308 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	PDCD2	Q16342	344 aa	Predicted RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	HEATR6	Q6AI08	1181 aa	Known RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	SWSAP1	Q6NVH7	229 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	BRICD5	Q6PL45	260 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	C11orf74	Q86VG3	221 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	FCHSD1	Q86WN1	690 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	PPM1K	Q8N3J5	372 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	ARL10	Q8N8L6	244 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	ATP6V1E2	Q96A05	226 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	HVCN1	Q96D96	273 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	IFT43	Q96FT9	208 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	XPO4	Q9C0E2	1151 aa	Known RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	SLC12A5	Q9H2X9	1139 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	PRKRIP1	Q9H875	184 aa	Predicted RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	ZFYVE28	Q9HCC9	887 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	MRGBP	Q9NV56	204 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	INTS7	Q9NVH2	962 aa	Known RBP	6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	RRN3	Q9NYV6	651 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	FNIP2	Q9P278	1114 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	TMX2	Q9Y320	296 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	SNX5	Q9Y5X3	404 aa		6.22	□□□□□ -1.41
PAF1-208	ENST00000598594	FAM83G	A6ND36	823 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	C19orf81	C9J6K1	198 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	DDX3Y	O15523	660 aa	Known RBP	6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	GFPT2	O94808	682 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	INMT	O95050	263 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	CNOT4	O95628	575 aa	Known RBP	6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	RPLP1	P05386	114 aa	Known RBP	6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	HSD3B1	P14060	373 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	ZKSCAN1	P17029	563 aa	Predicted RBP	6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	LPO	P22079	712 aa	Predicted RBP	6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	CYP2C19	P33261	490 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	KRT20	P35900	424 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	RAD52	P43351	418 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	SCTR	P47872	440 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	ALDH5A1	P51649	535 aa	Predicted RBP	6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	FOXK2	Q01167	660 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	LMNB2	Q03252	620 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	GRM2	Q14416	872 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	PCBP1	Q15365	356 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	DHCR24	Q15392	516 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	ABCB5	Q2M3G0	1257 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	ZC3H12A	Q5D1E8	599 aa	Known RBP	6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	VPS53	Q5VIR6	699 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	FOXB2	Q5VYV0	432 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	CYB5RL	Q6IPT4	315 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	FAM196A	Q6ZSG2	479 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	GALNT5	Q7Z7M9	940 aa		6.21	□□□□□ -1.42
PAF1-208	ENST00000598594	TBC1D1	Q86TI0	1168 aa	Predicted RBP	6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms