RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 ZSCAN10Q96SZ4 725 aaPredicted RBP14.07□□□□□ -0.16
USHBP1-207ENST00000597928 ALDH8A1Q9H2A2 487 aaPredicted RBP14.07□□□□□ -0.16
USHBP1-207ENST00000597928 USP17L3A6NCW0 530 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 USP17L4A6NCW7 530 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 CCDC175P0C221 793 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 TRIM21P19474 475 aaKnown RBP14.06□□□□□ -0.16
USHBP1-207ENST00000597928 CLCN6P51797 869 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 EARS2Q5JPH6 523 aaKnown RBP14.06□□□□□ -0.16
USHBP1-207ENST00000597928 SOGA3Q5TF21 947 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 DYMQ7RTS9 669 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 USP17L1Q7RTZ2 530 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 CRNKL1Q9BZJ0 848 aaKnown RBP14.06□□□□□ -0.16
USHBP1-207ENST00000597928 UBA5Q9GZZ9 404 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 PRDM4Q9UKN5 801 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 KRT9P35527 623 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 HSP90B2PQ58FF3 399 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 ZSCAN29Q8IWY8 852 aaPredicted RBP14.06□□□□□ -0.16
USHBP1-207ENST00000597928 TBC1D7Q9P0N9 293 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 GDAQ9Y2T3 454 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 TRIM49BA6NDI0 452 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 DNAJC21Q5F1R6 531 aaKnown RBP14.06□□□□□ -0.16
USHBP1-207ENST00000597928 SLC51AQ86UW1 340 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 GOLGA6L1Q8N7Z2 621 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 JADE2Q9NQC1 790 aa14.06□□□□□ -0.16
USHBP1-207ENST00000597928 FMNL1O95466 1100 aaPredicted RBP14.05□□□□□ -0.16
USHBP1-207ENST00000597928 ZSCAN20P17040 1043 aaPredicted RBP14.05□□□□□ -0.16
USHBP1-207ENST00000597928 ASIC1P78348 528 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 SARM1Q6SZW1 724 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 POLD4Q9HCU8 107 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 MROH5Q6ZUA9 1318 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 AKAP12Q02952 1782 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 NWD1Q149M9 1564 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 NAPAP54920 295 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 RASGRP2Q7LDG7 609 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 ANKRD13CQ8N6S4 541 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 CENPHQ9H3R5 247 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 IMPACTQ9P2X3 320 aa14.05□□□□□ -0.16
USHBP1-207ENST00000597928 HIBADHP31937 336 aaKnown RBP14.04□□□□□ -0.16
USHBP1-207ENST00000597928 TMTC2Q8N394 836 aa14.04□□□□□ -0.16
USHBP1-207ENST00000597928 ENAHQ8N8S7 591 aaPredicted RBP14.04□□□□□ -0.16
USHBP1-207ENST00000597928 ARFGAP3Q9NP61 516 aa14.04□□□□□ -0.16
USHBP1-207ENST00000597928 KRT18P05783 430 aaKnown RBP14.04□□□□□ -0.16
USHBP1-207ENST00000597928 IFNAR1P17181 557 aa14.04□□□□□ -0.16
USHBP1-207ENST00000597928 MYO1BO43795 1136 aa14.04□□□□□ -0.16
USHBP1-207ENST00000597928 TXKP42681 527 aa14.04□□□□□ -0.16
USHBP1-207ENST00000597928 TOB1P50616 345 aaPredicted RBP14.04□□□□□ -0.16
USHBP1-207ENST00000597928 RESP18Q5W5W9 173 aa14.04□□□□□ -0.16
USHBP1-207ENST00000597928 HPS3Q969F9 1004 aa14.04□□□□□ -0.16
USHBP1-207ENST00000597928 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
USHBP1-207ENST00000597928 ANKRD65E5RJM6 399 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 ARHGAP6O43182 974 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 KCTD19Q17RG1 926 aaPredicted RBP14.03□□□□□ -0.16
USHBP1-207ENST00000597928 RBM43Q6ZSC3 357 aaKnown RBP14.03□□□□□ -0.16
USHBP1-207ENST00000597928 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 VSTM4Q8IW00 320 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 CCDC47Q96A33 483 aaKnown RBP14.03□□□□□ -0.16
USHBP1-207ENST00000597928 FEZ1Q99689 392 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 MMRN2Q9H8L6 949 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 ZNHIT6Q9NWK9 470 aaKnown RBP14.03□□□□□ -0.16
USHBP1-207ENST00000597928 VPS18Q9P253 973 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 CDC25BP30305 580 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 DMTNQ08495 405 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 CUL4BQ13620 913 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 NCAPHQ15003 741 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 IQUBQ8NA54 791 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 NELFBQ8WX92 580 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 CSF1RP07333 972 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 CCDC96Q2M329 555 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 TDRD12Q587J7 1177 aaKnown RBP14.03□□□□□ -0.16
USHBP1-207ENST00000597928 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
USHBP1-207ENST00000597928 MLKLQ8NB16 471 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 RGPD2P0DJD1 1756 aa14.03□□□□□ -0.16
USHBP1-207ENST00000597928 STIM1Q13586 685 aa14.02□□□□□ -0.16
USHBP1-207ENST00000597928 SPTY2D1Q68D10 685 aaPredicted RBP14.02□□□□□ -0.16
USHBP1-207ENST00000597928 SRRTQ9BXP5 876 aaKnown RBP14.02□□□□□ -0.16
USHBP1-207ENST00000597928 FRMPD2Q68DX3 1309 aaPredicted RBP14.02□□□□□ -0.16
USHBP1-207ENST00000597928 CCNT1O60563 726 aaKnown RBP14.02□□□□□ -0.17
USHBP1-207ENST00000597928 GNAT2P19087 354 aa14.02□□□□□ -0.17
USHBP1-207ENST00000597928 DTHD1Q6ZMT9 781 aa14.02□□□□□ -0.17
USHBP1-207ENST00000597928 IL17RAQ96F46 866 aa14.02□□□□□ -0.17
USHBP1-207ENST00000597928 FAM217BQ9NTX9 383 aaPredicted RBP14.02□□□□□ -0.17
USHBP1-207ENST00000597928 BIN2Q9UBW5 565 aaPredicted RBP14.02□□□□□ -0.17
USHBP1-207ENST00000597928 WNT7AO00755 349 aa14.02□□□□□ -0.17
USHBP1-207ENST00000597928 PPP6R2O75170 966 aa14.02□□□□□ -0.17
USHBP1-207ENST00000597928 BMP6P22004 513 aa14.02□□□□□ -0.17
USHBP1-207ENST00000597928 TNNI2P48788 182 aa14.02□□□□□ -0.17
USHBP1-207ENST00000597928 RPS8P62241 208 aaKnown RBP14.02□□□□□ -0.17
USHBP1-207ENST00000597928 MECOMQ03112 1051 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 PTPAQ15257 358 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 SLC35F6Q8N357 371 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 STAG2Q8N3U4 1231 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 TRIM10Q9UDY6 481 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 RFC4P35249 363 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 GPS2Q13227 327 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 KANK3Q6NY19 840 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 PAGE5Q96GU1 130 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 SUGCTQ9HAC7 445 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 TACC3Q9Y6A5 838 aa14.01□□□□□ -0.17
USHBP1-207ENST00000597928 SRGAP2O75044 1071 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms