RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 EPHX3Q9H6B9 360 aa13.18□□□□□ -0.3
SMG9-206ENST00000597598 EMILIN3Q9NT22 766 aa13.18□□□□□ -0.3
SMG9-206ENST00000597598 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
SMG9-206ENST00000597598 RAG1P15918 1043 aa13.17□□□□□ -0.3
SMG9-206ENST00000597598 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
SMG9-206ENST00000597598 SPTY2D1Q68D10 685 aaPredicted RBP13.17□□□□□ -0.3
SMG9-206ENST00000597598 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
SMG9-206ENST00000597598 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
SMG9-206ENST00000597598 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
SMG9-206ENST00000597598 PHF24Q9UPV7 400 aa13.17□□□□□ -0.3
SMG9-206ENST00000597598 NDUFB9Q9Y6M9 179 aa13.17□□□□□ -0.3
SMG9-206ENST00000597598 PBX2P40425 430 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 MECOMQ03112 1051 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 RASGRF1Q13972 1273 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 CCDC85BQ15834 202 aaPredicted RBP13.16□□□□□ -0.3
SMG9-206ENST00000597598 TMEM31Q5JXX7 168 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 CCDC102BQ68D86 513 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 SNX27Q96L92 541 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.16□□□□□ -0.34e-7■□□□□ 10.5
SMG9-206ENST00000597598 ABCF2Q9UG63 623 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 IVNS1ABPQ9Y6Y0 642 aa13.16□□□□□ -0.3
SMG9-206ENST00000597598 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
SMG9-206ENST00000597598 USP17L15C9J2P7 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 USP17L13C9JLJ4 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 USP17L11C9JVI0 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 USP17L18D6R9N7 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 USP17L22D6RA61 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 USP17L17D6RBQ6 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 USP17L19D6RCP7 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 USP17L20D6RJB6 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 GPR37L1O60883 481 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 CIAO1O76071 339 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 USP17L24Q0WX57 530 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 ANO1Q5XXA6 986 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 C16orf59Q7L2K0 433 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 ANKRD33Q7Z3H0 272 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 TOX2Q96NM4 488 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 DHX36Q9H2U1 1008 aaKnown RBP13.15□□□□□ -0.3
SMG9-206ENST00000597598 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 CEP126Q9P2H0 1117 aa13.15□□□□□ -0.3
SMG9-206ENST00000597598 SIPA1L1O43166 1804 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 STRNO43815 780 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 FAAP100Q0VG06 881 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 AAK1Q2M2I8 961 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 SHROOM1Q2M3G4 852 aaPredicted RBP13.14□□□□□ -0.31
SMG9-206ENST00000597598 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 ERICH6Q7L0X2 663 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 ALYREFQ86V81 257 aaKnown RBP13.14□□□□□ -0.31
SMG9-206ENST00000597598 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
SMG9-206ENST00000597598 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
SMG9-206ENST00000597598 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
SMG9-206ENST00000597598 C11orf16Q9NQ32 467 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 TMEM39AQ9NV64 488 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 BTBD7Q9P203 1132 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 ZBTB21Q9ULJ3 1066 aa13.14□□□□□ -0.31
SMG9-206ENST00000597598 PLXNA1Q9UIW2 1896 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 TIMP1P01033 207 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 LDHCP07864 332 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 IGFBP4P22692 258 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 DPP9Q86TI2 863 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 NSUN4Q96CB9 384 aaKnown RBP13.13□□□□□ -0.31
SMG9-206ENST00000597598 ZNF236Q9UL36 1845 aa13.13□□□□□ -0.31
SMG9-206ENST00000597598 TRANK1O15050 2925 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 ERC2O15083 957 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
SMG9-206ENST00000597598 COBLO75128 1261 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 ADORA2AP29274 412 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 ADORA1P30542 326 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 GSTO1P78417 241 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 TFF2Q03403 129 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 CCDC129Q6ZRS4 1044 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 WDR63Q8IWG1 891 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 NRBP1Q9UHY1 535 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 TBX21Q9UL17 535 aa13.12□□□□□ -0.31
SMG9-206ENST00000597598 A0A1W2PQ45 241 aaPredicted RBP13.11□□□□□ -0.31
SMG9-206ENST00000597598 A0A1W2PQY0 241 aa13.11□□□□□ -0.31
SMG9-206ENST00000597598 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
SMG9-206ENST00000597598 GDF11O95390 407 aa13.11□□□□□ -0.31
SMG9-206ENST00000597598 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
SMG9-206ENST00000597598 KCNQ1P51787 676 aa13.11□□□□□ -0.31
SMG9-206ENST00000597598 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
SMG9-206ENST00000597598 PPIGQ13427 754 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■□□□ 11.4
SMG9-206ENST00000597598 RAB30Q15771 203 aa13.11□□□□□ -0.31
SMG9-206ENST00000597598 PRAMEF19Q5SWL8 479 aa13.11□□□□□ -0.31
SMG9-206ENST00000597598 CCDC174Q6PII3 467 aa13.11□□□□□ -0.31
SMG9-206ENST00000597598 TEX11Q8IYF3 940 aa13.11□□□□□ -0.31
SMG9-206ENST00000597598 MIER1Q8N108 512 aa13.11□□□□□ -0.31
SMG9-206ENST00000597598 SMCHD1A6NHR9 2005 aa13.1□□□□□ -0.31
SMG9-206ENST00000597598 POU3F3P20264 500 aaPredicted RBP13.1□□□□□ -0.31
SMG9-206ENST00000597598 IL15P40933 162 aaPredicted RBP13.1□□□□□ -0.31
SMG9-206ENST00000597598 RNF180Q86T96 592 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms