RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FAM47AQ5JRC9 791 aa16.98■□□□□ 0.31
VRK3-213ENST00000597215 CREB3L3Q68CJ9 461 aa16.98■□□□□ 0.31
VRK3-213ENST00000597215 NEDD1Q8NHV4 660 aa16.98■□□□□ 0.31
VRK3-213ENST00000597215 ESR2Q92731 530 aa16.98■□□□□ 0.31
VRK3-213ENST00000597215 KRT23Q9C075 422 aa16.98■□□□□ 0.31
VRK3-213ENST00000597215 KANSL2Q9H9L4 492 aa16.98■□□□□ 0.31
VRK3-213ENST00000597215 CETPP11597 493 aa16.97■□□□□ 0.31
VRK3-213ENST00000597215 INHBEP58166 350 aa16.97■□□□□ 0.31
VRK3-213ENST00000597215 PPP4R3BQ5MIZ7 849 aa16.97■□□□□ 0.31
VRK3-213ENST00000597215 MS4A4AQ96JQ5 239 aa16.97■□□□□ 0.31
VRK3-213ENST00000597215 ZIC5Q96T25 663 aa16.97■□□□□ 0.31
VRK3-213ENST00000597215 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.97■□□□□ 0.31
VRK3-213ENST00000597215 ARHGEF10LQ9HCE6 1279 aa16.97■□□□□ 0.31
VRK3-213ENST00000597215 CCL15-CCL14A0A0B4J2E2 113 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 IGKV6D-41A0A0C4DH26 115 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 A0A0G2JLL6 359 aaPredicted RBP16.96■□□□□ 0.31
VRK3-213ENST00000597215 B4E1Z4 1266 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 USP17L10C9JJH3 530 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 E7EWF7 191 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 BACE1P56817 501 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 CCL15Q16663 113 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 C8orf34Q49A92 452 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 PRRT2Q7Z6L0 340 aaPredicted RBP16.96■□□□□ 0.31
VRK3-213ENST00000597215 FEZ1Q99689 392 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 SH2D4AQ9H788 454 aa16.96■□□□□ 0.31
VRK3-213ENST00000597215 TESPA1A2RU30 521 aaPredicted RBP16.95■□□□□ 0.3
VRK3-213ENST00000597215 C19orf81C9J6K1 198 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 KDM4AO75164 1064 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
VRK3-213ENST00000597215 USP14P54578 494 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 MTMR2Q13614 643 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
VRK3-213ENST00000597215 RALYLQ86SE5 291 aaKnown RBP16.95■□□□□ 0.3
VRK3-213ENST00000597215 CLEC10AQ8IUN9 316 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 NCOA7Q8NI08 942 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 ACER1Q8TDN7 264 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 BRI3BPQ8WY22 251 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 CEP95Q96GE4 821 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 USP26Q9BXU7 913 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 MTMR4Q9NYA4 1195 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 NYAP2Q9P242 653 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 TAF6LQ9Y6J9 622 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 MYH4Q9Y623 1939 aa16.95■□□□□ 0.3
VRK3-213ENST00000597215 LOC285556D6RIA3 1793 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 TTLL1O95922 423 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 EEF2P13639 858 aaKnown RBP16.94■□□□□ 0.3
VRK3-213ENST00000597215 MCCP23508 829 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 HSPA4P34932 840 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 TM4SF4P48230 202 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 HMGCS2P54868 508 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 ATP2B2Q01814 1243 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 KRT32Q14532 448 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 SH3D19Q5HYK7 790 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 STOX1Q6ZVD7 989 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 PROCA1Q8NCQ7 364 aaPredicted RBP16.94■□□□□ 0.3
VRK3-213ENST00000597215 KIAA1683Q9H0B3 1180 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 TCP11L1Q9NUJ3 509 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 TMOD4Q9NZQ9 345 aa16.94■□□□□ 0.3
VRK3-213ENST00000597215 A0A1W2PRG0 241 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 MAP2K1Q02750 393 aaPredicted RBP16.93■□□□□ 0.3
VRK3-213ENST00000597215 TSGA10IPQ3SY00 556 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 CCDC178Q5BJE1 867 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 OTUD7BQ6GQQ9 843 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 GADL1Q6ZQY3 521 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 SIAH1Q8IUQ4 282 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 KCNB2Q92953 911 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 ZSWIM5Q9P217 1185 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 TMX2Q9Y320 296 aa16.93■□□□□ 0.3
VRK3-213ENST00000597215 NMT2O60551 498 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 MOGSQ13724 837 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 ZYXQ15942 572 aaKnown RBP16.92■□□□□ 0.3
VRK3-213ENST00000597215 IFNL1Q8IU54 200 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 JMYQ8N9B5 988 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 NKX2-3Q8TAU0 364 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 UBAC1Q9BSL1 405 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 CLIP2Q9UDT6 1046 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 SYNPO2Q9UMS6 1093 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 STX8Q9UNK0 236 aa16.92■□□□□ 0.3
VRK3-213ENST00000597215 BTBD19C9JJ37 291 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 IGF2BP3O00425 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
VRK3-213ENST00000597215 NOVP48745 357 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 ANKRD23Q86SG2 305 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 MB21D2Q8IYB1 491 aaPredicted RBP16.91■□□□□ 0.3
VRK3-213ENST00000597215 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 MKL1Q969V6 931 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 C12orf42Q96LP6 360 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 PTPN18Q99952 460 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 VCPKMTQ9H867 229 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 GOPCQ9HD26 462 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 ZCCHC17Q9NP64 241 aaKnown RBP16.91■□□□□ 0.3
VRK3-213ENST00000597215 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 AGTPBP1Q9UPW5 1226 aa16.91■□□□□ 0.3
VRK3-213ENST00000597215 SEC24BO95487 1268 aa16.9■□□□□ 0.3
VRK3-213ENST00000597215 ALDH1A1P00352 501 aa16.9■□□□□ 0.3
VRK3-213ENST00000597215 DGKZQ13574 1117 aa16.9■□□□□ 0.3
VRK3-213ENST00000597215 CYB5R4Q7L1T6 521 aa16.9■□□□□ 0.3
VRK3-213ENST00000597215 LPAR1Q92633 364 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms