RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 NEDD1Q8NHV4 660 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 MS4A4AQ96JQ5 239 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 ZIC5Q96T25 663 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
VRK3-211ENST00000596445 KRT23Q9C075 422 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 KANSL2Q9H9L4 492 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 NEDD4P46934 1319 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 IGKV6D-41A0A0C4DH26 115 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 A0A0G2JLL6 359 aaPredicted RBP9.88□□□□□ -0.83
VRK3-211ENST00000596445 TESPA1A2RU30 521 aaPredicted RBP9.88□□□□□ -0.83
VRK3-211ENST00000596445 TRIM75PA6NK02 468 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 C19orf81C9J6K1 198 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 USP17L10C9JJH3 530 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 E7EWF7 191 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 TM4SF4P48230 202 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 BACE1P56817 501 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 ICA1Q05084 483 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 SREBF2Q12772 1141 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 TRDNQ13061 729 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 FAM47AQ5JRC9 791 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 PRRT2Q7Z6L0 340 aaPredicted RBP9.88□□□□□ -0.83
VRK3-211ENST00000596445 ESR2Q92731 530 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 USP26Q9BXU7 913 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 TCP11L1Q9NUJ3 509 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 TAF6LQ9Y6J9 622 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 LOC285556D6RIA3 1793 aa9.88□□□□□ -0.83
VRK3-211ENST00000596445 CCL15-CCL14A0A0B4J2E2 113 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 B4E1Z4 1266 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 KDM4AO75164 1064 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 EEF2P13639 858 aaKnown RBP9.87□□□□□ -0.83
VRK3-211ENST00000596445 ZKSCAN1P17029 563 aaPredicted RBP9.87□□□□□ -0.83
VRK3-211ENST00000596445 USP14P54578 494 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 MTMR2Q13614 643 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 CCL15Q16663 113 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 TSGA10IPQ3SY00 556 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 SH3D19Q5HYK7 790 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 STOX1Q6ZVD7 989 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 FASTKD5Q7L8L6 764 aaKnown RBP9.87□□□□□ -0.83
VRK3-211ENST00000596445 CLEC10AQ8IUN9 316 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 SIAH1Q8IUQ4 282 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 ACER1Q8TDN7 264 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 BRI3BPQ8WY22 251 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 KCNB2Q92953 911 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 CEP95Q96GE4 821 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 KIAA1683Q9H0B3 1180 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 SH2D4AQ9H788 454 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 ARHGEF10LQ9HCE6 1279 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 IL17RBQ9NRM6 502 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 MTMR4Q9NYA4 1195 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 NYAP2Q9P242 653 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 TMX2Q9Y320 296 aa9.87□□□□□ -0.83
VRK3-211ENST00000596445 A0A1W2PRG0 241 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 TTLL1O95922 423 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 HSPA4P34932 840 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 HMGCS2P54868 508 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 ATP2B2Q01814 1243 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 MAP2K1Q02750 393 aaPredicted RBP9.86□□□□□ -0.83
VRK3-211ENST00000596445 MOGSQ13724 837 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 USP17L2Q6R6M4 530 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 RALYLQ86SE5 291 aaKnown RBP9.86□□□□□ -0.83
VRK3-211ENST00000596445 IQCA1Q86XH1 822 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 JMYQ8N9B5 988 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 PROCA1Q8NCQ7 364 aaPredicted RBP9.86□□□□□ -0.83
VRK3-211ENST00000596445 NCOA7Q8NI08 942 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 NKX2-3Q8TAU0 364 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 MKL1Q969V6 931 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 FEZ1Q99689 392 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 PTPN18Q99952 460 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 TMOD4Q9NZQ9 345 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 ZSWIM5Q9P217 1185 aa9.86□□□□□ -0.83
VRK3-211ENST00000596445 BTBD19C9JJ37 291 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 IGF2BP3O00425 579 aaKnown RBP eCLIP9.85□□□□□ -0.83
VRK3-211ENST00000596445 NMT2O60551 498 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 SEC24BO95487 1268 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 MCCP23508 829 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 NOVP48745 357 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 KRT32Q14532 448 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 OTUD7BQ6GQQ9 843 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 GPAT2Q6NUI2 795 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 GADL1Q6ZQY3 521 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 CYB5R4Q7L1T6 521 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 ANKRD23Q86SG2 305 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 IFNL1Q8IU54 200 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 MB21D2Q8IYB1 491 aaPredicted RBP9.85□□□□□ -0.83
VRK3-211ENST00000596445 RASEFQ8IZ41 740 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 C12orf42Q96LP6 360 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 TTC14Q96N46 770 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 ZCCHC17Q9NP64 241 aaKnown RBP9.85□□□□□ -0.83
VRK3-211ENST00000596445 EMILIN3Q9NT22 766 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 CLIP2Q9UDT6 1046 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 SYNPO2Q9UMS6 1093 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 STX8Q9UNK0 236 aa9.85□□□□□ -0.83
VRK3-211ENST00000596445 ALDH1A1P00352 501 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 DGKZQ13574 1117 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 ZYXQ15942 572 aaKnown RBP9.84□□□□□ -0.83
VRK3-211ENST00000596445 RCSD1Q6JBY9 416 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 DGKHQ86XP1 1220 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms