RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 CCDC82Q8N4S0 544 aa26.32■■□□□ 1.8
SPTBN4-209ENST00000596411 TNRC6CQ9HCJ0 1690 aaKnown RBP26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 CYP2D7A0A087X1C5 515 aa26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 USP27XA6NNY8 438 aa26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 SMIM22K7EJ46 135 aa26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 POLR2DO15514 142 aaKnown RBP26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 KLRK1P26718 216 aa26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 UBASH3AP57075 661 aa26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 ENOX1Q8TC92 643 aaKnown RBP26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 SMARCE1Q969G3 411 aa26.31■■□□□ 1.8
SPTBN4-209ENST00000596411 SBF2Q86WG5 1849 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 TOM1O60784 492 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 PLEKHA8P1O95397 391 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 ATP1A3P13637 1013 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 TRAPPC10P48553 1259 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 NPY5RQ15761 445 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 VSTM4Q8IW00 320 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 VPS54Q9P1Q0 977 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 SERTAD1Q9UHV2 236 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 ROBO3Q96MS0 1386 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 BCL11BQ9C0K0 894 aaPredicted RBP26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 CSRNP2Q9H175 543 aa26.3■■□□□ 1.8
SPTBN4-209ENST00000596411 CCP110O43303 1012 aa26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 ZNF18P17022 549 aa26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 PDE4BQ07343 736 aa26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 E4F1Q66K89 784 aaPredicted RBP26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 ISM2Q6H9L7 571 aa26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 FNBP4Q8N3X1 1017 aaPredicted RBP26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 CTCFLQ8NI51 663 aaPredicted RBP26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 TMX1Q9H3N1 280 aa26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 SRP68Q9UHB9 627 aaKnown RBP26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 V9GY48 417 aaPredicted RBP26.29■■□□□ 1.8
SPTBN4-209ENST00000596411 ERCC5P28715 1186 aaPredicted RBP26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 SH3RF1Q7Z6J0 888 aa26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 TSC1Q92574 1164 aa26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 ANKS1AQ92625 1134 aa26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 RTCBQ9Y3I0 505 aaKnown RBP26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 FOXN1O15353 648 aa26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 SERPINC1P01008 464 aa26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 SPECC1Q5M775 1068 aa26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 C15orf52Q6ZUT6 534 aaKnown RBP26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 FCHSD1Q86WN1 690 aa26.28■■□□□ 1.8
SPTBN4-209ENST00000596411 GNPATO15228 680 aa26.27■■□□□ 1.8
SPTBN4-209ENST00000596411 PRDX5P30044 214 aa26.27■■□□□ 1.8
SPTBN4-209ENST00000596411 CCDC94Q9BW85 323 aaPredicted RBP26.27■■□□□ 1.8
SPTBN4-209ENST00000596411 FANCLQ9NW38 375 aa26.27■■□□□ 1.8
SPTBN4-209ENST00000596411 MKRN1Q9UHC7 482 aaKnown RBP26.27■■□□□ 1.8
SPTBN4-209ENST00000596411 TAOK2Q9UL54 1235 aa26.27■■□□□ 1.8
SPTBN4-209ENST00000596411 LEMD3Q9Y2U8 911 aa26.27■■□□□ 1.8
SPTBN4-209ENST00000596411 PRDM1O75626 825 aa26.26■■□□□ 1.79
SPTBN4-209ENST00000596411 CCDC178Q5BJE1 867 aa26.26■■□□□ 1.79
SPTBN4-209ENST00000596411 SLFN14P0C7P3 912 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 PRR29P0C7W0 189 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 ATP2C1P98194 919 aaPredicted RBP26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 SRBD1Q8N5C6 995 aaKnown RBP26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 WDR66Q8TBY9 1149 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 DPF2Q92785 391 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 PYM1Q9BRP8 204 aaKnown RBP26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 SCG2P13521 617 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 KIF5BP33176 963 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 PFKFB3Q16875 520 aaPredicted RBP26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 CFAP100Q494V2 611 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 DGKHQ86XP1 1220 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 FAM177A1Q8N128 213 aaPredicted RBP26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 KIF18AQ8NI77 898 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 TFCP2L1Q9NZI6 479 aa26.25■■□□□ 1.79
SPTBN4-209ENST00000596411 PLCD1P51178 756 aa26.24■■□□□ 1.79
SPTBN4-209ENST00000596411 KCNQ4P56696 695 aa26.24■■□□□ 1.79
SPTBN4-209ENST00000596411 NCBP1Q09161 790 aaKnown RBP26.24■■□□□ 1.79
SPTBN4-209ENST00000596411 EARS2Q5JPH6 523 aaKnown RBP26.24■■□□□ 1.79
SPTBN4-209ENST00000596411 PPP1R13BQ96KQ4 1090 aa26.24■■□□□ 1.79
SPTBN4-209ENST00000596411 SH3GLB2Q9NR46 395 aa26.24■■□□□ 1.79
SPTBN4-209ENST00000596411 CCNL1Q9UK58 526 aaPredicted RBP26.24■■□□□ 1.79
SPTBN4-209ENST00000596411 TBX2Q13207 712 aaPredicted RBP26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 TTC38Q5R3I4 469 aa26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 RCSD1Q6JBY9 416 aa26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 CERS3Q8IU89 383 aa26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 FAM205CA6NFA0 338 aa26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 GRAPQ13588 217 aa26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 DZIP1Q86YF9 867 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 GRAPLQ8TC17 118 aaPredicted RBP26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 ARHGEF1Q92888 912 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 INTS13Q9NVM9 706 aa26.23■■□□□ 1.79
SPTBN4-209ENST00000596411 TOP1P11387 765 aaKnown RBP26.22■■□□□ 1.79
SPTBN4-209ENST00000596411 PPP4CP60510 307 aa26.22■■□□□ 1.79
SPTBN4-209ENST00000596411 GSTO1P78417 241 aa26.22■■□□□ 1.79
SPTBN4-209ENST00000596411 C12orf60Q5U649 245 aa26.22■■□□□ 1.79
SPTBN4-209ENST00000596411 USP49Q70CQ1 688 aa26.22■■□□□ 1.79
SPTBN4-209ENST00000596411 PTF1AQ7RTS3 328 aa26.22■■□□□ 1.79
SPTBN4-209ENST00000596411 TCP11L1Q9NUJ3 509 aa26.22■■□□□ 1.79
SPTBN4-209ENST00000596411 NAV1Q8NEY1 1877 aa26.22■■□□□ 1.79
SPTBN4-209ENST00000596411 CALML3P27482 149 aa26.21■■□□□ 1.79
SPTBN4-209ENST00000596411 FMR1Q06787 632 aaKnown RBP eCLIP26.21■■□□□ 1.79
SPTBN4-209ENST00000596411 NGLY1Q96IV0 654 aa26.21■■□□□ 1.79
SPTBN4-209ENST00000596411 GSDMAQ96QA5 445 aa26.21■■□□□ 1.79
SPTBN4-209ENST00000596411 TRMT1Q9NXH9 659 aaKnown RBP26.21■■□□□ 1.79
SPTBN4-209ENST00000596411 NFE2L3Q9Y4A8 694 aa26.21■■□□□ 1.79
SPTBN4-209ENST00000596411 PDCL2Q8N4E4 241 aa26.21■■□□□ 1.79
SPTBN4-209ENST00000596411 TSPY2A6NKD2 308 aa26.2■■□□□ 1.78
SPTBN4-209ENST00000596411 TXNRD3Q86VQ6 643 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms